Mus caroli (Ryukyu mouse): 110289986
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Entry
110289986 CDS
T05910
Symbol
Traf2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04064
NF-kappa B signaling pathway
mcal04071
Sphingolipid signaling pathway
mcal04137
Mitophagy - animal
mcal04141
Protein processing in endoplasmic reticulum
mcal04210
Apoptosis
mcal04217
Necroptosis
mcal04380
Osteoclast differentiation
mcal04621
NOD-like receptor signaling pathway
mcal04622
RIG-I-like receptor signaling pathway
mcal04657
IL-17 signaling pathway
mcal04668
TNF signaling pathway
mcal04920
Adipocytokine signaling pathway
mcal04932
Non-alcoholic fatty liver disease
mcal05010
Alzheimer disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05132
Salmonella infection
mcal05135
Yersinia infection
mcal05160
Hepatitis C
mcal05163
Human cytomegalovirus infection
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05168
Herpes simplex virus 1 infection
mcal05169
Epstein-Barr virus infection
mcal05170
Human immunodeficiency virus 1 infection
mcal05200
Pathways in cancer
mcal05203
Viral carcinogenesis
mcal05222
Small cell lung cancer
mcal05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110289986 (Traf2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110289986 (Traf2)
04064 NF-kappa B signaling pathway
110289986 (Traf2)
04668 TNF signaling pathway
110289986 (Traf2)
04071 Sphingolipid signaling pathway
110289986 (Traf2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110289986 (Traf2)
09143 Cell growth and death
04210 Apoptosis
110289986 (Traf2)
04217 Necroptosis
110289986 (Traf2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110289986 (Traf2)
04622 RIG-I-like receptor signaling pathway
110289986 (Traf2)
04657 IL-17 signaling pathway
110289986 (Traf2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
110289986 (Traf2)
09158 Development and regeneration
04380 Osteoclast differentiation
110289986 (Traf2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110289986 (Traf2)
05203 Viral carcinogenesis
110289986 (Traf2)
09162 Cancer: specific types
05222 Small cell lung cancer
110289986 (Traf2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110289986 (Traf2)
05160 Hepatitis C
110289986 (Traf2)
05168 Herpes simplex virus 1 infection
110289986 (Traf2)
05163 Human cytomegalovirus infection
110289986 (Traf2)
05167 Kaposi sarcoma-associated herpesvirus infection
110289986 (Traf2)
05169 Epstein-Barr virus infection
110289986 (Traf2)
09171 Infectious disease: bacterial
05132 Salmonella infection
110289986 (Traf2)
05135 Yersinia infection
110289986 (Traf2)
09164 Neurodegenerative disease
05010 Alzheimer disease
110289986 (Traf2)
05014 Amyotrophic lateral sclerosis
110289986 (Traf2)
05016 Huntington disease
110289986 (Traf2)
05017 Spinocerebellar ataxia
110289986 (Traf2)
05022 Pathways of neurodegeneration - multiple diseases
110289986 (Traf2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110289986 (Traf2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
110289986 (Traf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110289986 (Traf2)
04121 Ubiquitin system [BR:
mcal04121
]
110289986 (Traf2)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110289986 (Traf2)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110289986 (Traf2)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110289986 (Traf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_4
zf-C3HC4_2
PIN_9
MATH
Cep57_CLD
DUF4795
Motif
Other DBs
NCBI-GeneID:
110289986
NCBI-ProteinID:
XP_021012094
Ensembl:
MGP_CAROLIEiJ_G0023281
UniProt:
A0A6P7QZM6
LinkDB
All DBs
Position
2:complement(21416920..21445455)
Genome browser
AA seq
508 aa
AA seq
DB search
MAAASVTSPGSLDLLQPGFSKTLLGTRLEAKYLCSACRNILRRPFQAQCGHRYCSFCLTS
ILRCASILSSSGPQNCAACVHEGLYEEGVSILESSSAFPDNAARREVESLPAVCPNDGCT
WKGTLKEYESCHEGQCPFLLTECPACKGLIRLSEKEHHTEQECPKRSLSCQHCRAPCSHV
DLEVHYEVCPKFPLTCDGCGKKKIPREKFQDHVRACSKCRVLCRFHTVGCSEMVETENLQ
DHEVQRLREHLALLLSSFLEAQASPGTLNQVGPELLQRCQILEQKIATFENIVCVLNREV
ERVAVTAEACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVSELEVSTYDGV
FIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVV
MKGPNDALLQWPFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFC
PVSKMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccagtgtgacttcccctggctccctagatctgctacagcctggcttctcc
aagaccctcctggggaccaggttagaagccaagtacctctgttcagcctgcagaaacatc
ctgcggaggcctttccaggcccagtgtgggcaccgctactgctccttctgcctgaccagc
atcctcaggtgtgcatccattctctccagctctgggcctcagaactgtgcggcctgtgtc
catgaaggcctgtatgaagaaggcgtttctattctagagagtagttcggcctttccagat
aacgctgcccgcagagaggtggagagcctgccagctgtctgtcccaatgatggatgcact
tggaaggggaccttgaaagaatacgagagctgccacgaaggacagtgcccattcctgctg
acagagtgtcctgcatgtaaaggcctgatccgcctcagcgagaaggagcaccacactgag
caggaatgccccaaaaggagcctgagctgccagcactgcagagcaccctgtagccacgtg
gacctggaggtacactatgaggtctgccccaagtttcccttaacctgtgatggctgtggc
aagaagaagatccctcgggagaagtttcaggaccatgttagagcatgcagcaaatgccgg
gttctctgcagattccacacagttggctgttcagagatggtggagactgagaacctgcag
gatcatgaggtgcagcggctacgggaacacctagccctactgctgagctcattcctggag
gcccaggcctccccgggaaccttgaaccaggtggggccagagctactccagcggtgccag
attttggagcagaagatagccacctttgagaacatcgtctgcgtcttgaaccgtgaagta
gagagggtagcagtgactgcagaggcttgtagccggcagcaccggctagaccaggacaag
attgaggccctgagtaacaaggtgcaacagctggagaggagcattggcctcaaggacctg
gccatggctgacctggagcagaaggtctccgagttggaagtatccacctatgatggggtc
ttcatctggaagatctctgacttcaccagaaagcgtcaggaagccgtagctggccggaca
ccggctatcttctccccagccttctacacaagcagatatggctacaagatgtgtctacgg
gtctacttgaatggcgacggcactgggcggggaactcatctgtctctcttcttcgtggtg
atgaaaggccccaatgatgctctgttgcagtggccttttaatcagaaggtaacattgatg
ttgctggaccataacaaccgggagcatgtgatcgacgcattcaggcctgatgtaacctcg
tcctccttccagaggcctgtcagtgacatgaacatagccagtggctgccccctcttctgc
cctgtgtccaagatggaggccaagaattcctatgtgcgggatgatgctatcttcatcaaa
gctattgtggacctaacaggactctag
DBGET
integrated database retrieval system
