KEGG   Mus caroli (Ryukyu mouse): 110293791
Entry
110293791         CDS       T05910                                 
Symbol
Ifnb1
Name
(RefSeq) interferon beta
  KO
K05415  interferon beta
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04060  Cytokine-cytokine receptor interaction
mcal04151  PI3K-Akt signaling pathway
mcal04217  Necroptosis
mcal04380  Osteoclast differentiation
mcal04620  Toll-like receptor signaling pathway
mcal04621  NOD-like receptor signaling pathway
mcal04622  RIG-I-like receptor signaling pathway
mcal04623  Cytosolic DNA-sensing pathway
mcal04630  JAK-STAT signaling pathway
mcal04650  Natural killer cell mediated cytotoxicity
mcal04668  TNF signaling pathway
mcal04936  Alcoholic liver disease
mcal05135  Yersinia infection
mcal05142  Chagas disease
mcal05152  Tuberculosis
mcal05160  Hepatitis C
mcal05161  Hepatitis B
mcal05162  Measles
mcal05163  Human cytomegalovirus infection
mcal05164  Influenza A
mcal05165  Human papillomavirus infection
mcal05167  Kaposi sarcoma-associated herpesvirus infection
mcal05168  Herpes simplex virus 1 infection
mcal05169  Epstein-Barr virus infection
mcal05170  Human immunodeficiency virus 1 infection
mcal05171  Coronavirus disease - COVID-19
mcal05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110293791 (Ifnb1)
   04668 TNF signaling pathway
    110293791 (Ifnb1)
   04151 PI3K-Akt signaling pathway
    110293791 (Ifnb1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110293791 (Ifnb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110293791 (Ifnb1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110293791 (Ifnb1)
   04621 NOD-like receptor signaling pathway
    110293791 (Ifnb1)
   04622 RIG-I-like receptor signaling pathway
    110293791 (Ifnb1)
   04623 Cytosolic DNA-sensing pathway
    110293791 (Ifnb1)
   04650 Natural killer cell mediated cytotoxicity
    110293791 (Ifnb1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    110293791 (Ifnb1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110293791 (Ifnb1)
   05161 Hepatitis B
    110293791 (Ifnb1)
   05160 Hepatitis C
    110293791 (Ifnb1)
   05171 Coronavirus disease - COVID-19
    110293791 (Ifnb1)
   05164 Influenza A
    110293791 (Ifnb1)
   05162 Measles
    110293791 (Ifnb1)
   05168 Herpes simplex virus 1 infection
    110293791 (Ifnb1)
   05163 Human cytomegalovirus infection
    110293791 (Ifnb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    110293791 (Ifnb1)
   05169 Epstein-Barr virus infection
    110293791 (Ifnb1)
   05165 Human papillomavirus infection
    110293791 (Ifnb1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    110293791 (Ifnb1)
   05152 Tuberculosis
    110293791 (Ifnb1)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    110293791 (Ifnb1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110293791 (Ifnb1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    110293791 (Ifnb1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mcal04052]
    110293791 (Ifnb1)
Cytokines and neuropeptides [BR:mcal04052]
 Cytokines
  Interferons
   110293791 (Ifnb1)
SSDB
Motif
Pfam: Interferon YWFCY Spore_III_AB YebO Tat SYCE1
Other DBs
NCBI-GeneID: 110293791
NCBI-ProteinID: XP_021017316
Ensembl: MGP_CAROLIEiJ_G0026141
UniProt: A0A6P5PTS9
LinkDB
Position
4:complement(81295316..81296084)
AA seq 182 aa
MNNRWILHAAFLLCFSTTALSINYEQLQLQQRTNLRKCQKLLEQLNGKINLTYRTDFKIP
MEMTEKMQKSHSAFAIQEMLQNVFLVFRNNFSSTGWNETLVERLLDELHQQTVFLKKILE
EKQEERLTWETSSTALHLKSYYWRVQRYLKLMKYNSYAWMVVRAEIFRNFFIIRRLTRNF
QK
NT seq 549 nt   +upstreamnt  +downstreamnt
atgaacaacaggtggatcctccacgctgcgttcctgctgtgcttctccaccacagccctc
tccatcaactacgagcagctccagctccaacaaaggacgaaccttcggaaatgtcagaag
ctcctggagcagctgaatggaaagatcaacctcacctacaggacggacttcaagatccct
atggagatgacggagaagatgcagaagagtcactctgcctttgccatccaagagatgctc
cagaatgtctttcttgtcttcagaaacaatttctccagcactgggtggaatgagactctt
gttgaacgtctcctggatgaactccaccagcagacagtgtttctgaagaaaatactagag
gaaaagcaagaagaaagattgacgtgggagacgtcctcaactgctctccacttgaagagc
tattactggagggtgcaaaggtaccttaaactcatgaagtacaacagctacgcctggatg
gtggtccgagcagagatcttcaggaactttttcatcatccgaagacttaccagaaacttc
caaaaatga

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