Mus caroli (Ryukyu mouse): 110293846
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Entry
110293846 CDS
T05910
Symbol
Otof
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110293846 (Otof)
Membrane trafficking [BR:
mcal04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110293846 (Otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
110293846
NCBI-ProteinID:
XP_021017349
Ensembl:
MGP_CAROLIEiJ_G0027057
UniProt:
A0A6P5PQB7
LinkDB
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Position
5:complement(24871978..24966319)
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AA seq
1997 aa
AA seq
DB search
MALIVHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNE
VLEIQIFNYSKVFSNKLIGTFCMVLQKVVEENRVEVTDTLMDDSNAIIKTSLSMEVRYQA
TDGTVGPWDDGDFLGDESLQEEKDSQETDGLLPGSRPSTRISGEKSFRRAGRSVFSAMKL
GKTRSHKEEPQRQDEPAVLEMEDLDHLAIQLGDGMDPDSVSLASVTALTSNVSNKRSKPD
IKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYF
VFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSD
PDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFYV
KIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQ
VVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYG
STRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVSE
SCTGRMEEFFLFGAFLEASMIDRKNGDKPITFEVTIGNYGNEVDGMSRPLRPRPRKEPGD
EEEVDLIQNSSDDEGDEAGDLASVSSTPPMRPQITDRNYFHLPYLEHKPCIYIKSWWPDQ
RRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLSLSDKD
QGRSSRTRLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRLCQNFLQKLRFLADE
PQHSIPDVFIWMMSNNKRIAYARVPSKDLLFSIVEEELGKDCAKVKTLFLKLPGKRGFGS
AGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQAFQ
LRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGE
AHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRG
SATAGDLLAAFELLQIGPSGKADLPPINGPVDMDRGPIMPVPVGIRPVLSKYRVEVLFWG
LRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPP
LNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAPNWNTTVRLLRGCHRLRNGGPSS
RPTGEVVVSMEPEEPVKKLETMVKLDATSDAVVKVDVAEDEKERKKKKKKGPSEEPEEEE
PDESMLDWWSKYFASIDTMKEQLRQHETSGTDLEEKEEMESAEGLKGPMKSKEKSRAAKE
EKKKKNQSPGPGQGSEAPEKKKAKIDELKVYPKELESEFDSFEDWLHTFNLLRGKTGDDE
DGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRIYVVR
ATDLHPADINGKADPYIAIKLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVA
VYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSIHGYNIWRDPMKPSQILTRLC
KEGKVDGPHFGPHGRVRVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGCR
LVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWN
TDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYL
AAEEKIVMSKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKT
AKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAE
KNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLFLLLLLFA
LFLYSLPGYLAKKILGA
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggccctgatcgtccacctcaagactgtctcagagctccgaggcagaggtgaccggatt
gccaaagtcactttccgagggcagtccttctactcccgggtcctggagaactgcgaggat
gtggctgactttgatgagacgttccggtggccagtggccagcagcatcgacaggaatgaa
gtgttggagattcagattttcaactacagcaaagtcttcagcaacaagctgatagggacc
ttctgcatggtgctgcagaaggtggtggaggagaatcgggtagaggtgaccgacacgctg
atggatgacagcaatgctatcatcaagaccagcctgagcatggaggtccggtatcaggcc
acagatggcactgtgggcccctgggatgatggagacttcctgggagatgaatccctccag
gaggagaaggacagccaggagacagatggactgctacctggttcccgacccagcacccgg
atatctggcgagaagagctttcgcagagcgggaaggagtgtgttctcggccatgaaactc
ggcaaaactcggtcccacaaagaggagccccaaagacaagatgagccagcagtgctggag
atggaggacctggaccacctagccattcagctgggggatgggatggaccctgactccgtg
tctctagcctcagtcaccgctctcaccagcaatgtctccaacaaacggtctaagccagac
attaagatggagcccagtgctggaaggcccatggattaccaggtcagcatcacagtgatt
gaagctcggcagctggtgggcttgaacatggaccctgtggtgtgtgtggaggtgggtgat
gacaagaaatacacgtcaatgaaggagtccacaaactgcccttactacaacgagtacttt
gtcttcgacttccatgtctctcctgatgtcatgtttgacaagatcatcaagatctcggtt
atccattctaagaacctgcttcggagcggcaccctggtgggttccttcaaaatggatgtg
gggactgtgtattcccagcctgaacaccagttccatcacaaatgggccatcctgtcagac
cccgatgacatctctgctgggctgaagggttatgtaaagtgtgatgtcgctgtggtgggc
aagggagacaacatcaagacaccccacaaggccaacgagacggatgaggacgacattgaa
gggaacctgctgctccccgagggcgtgccccccgaacggcagtgggcacggttctatgtg
aaaatttaccgagcagagggactgccccggatgaacacaagcctcatggccaacgtgaag
aaggcgttcattggtgagaacaaggacctcgtcgacccctatgtgcaagtcttctttgct
ggacaaaagggcaaaacatcagtgcagaagagcagctatgagccgctatggaacgagcag
gtcgttttcacagacctgttccctccactctgcaaacgcatgaaggtgcagatccgggac
tctgacaaggtcaatgatgtggccatcggcacccacttcatcgacctgcgcaagatttcc
aacgatggagacaaaggcttcctgcctaccctcggtccagcctgggtgaacatgtacggc
tctacgcgcaactacacactgctggacgagcaccaggacttgaatgaaggcctgggggag
ggtgtgtccttccgggcccgcctcatgttgggactagctgtggagatcctggacacctcc
aacccagagctcaccagctccacggaagtgcaggtggagcaggccacgcctgtctcggag
agctgcacagggagaatggaagaattttttctatttggagccttcttggaagcctcgatg
attgaccggaaaaatggggacaagccaattacctttgaggtgaccataggaaactacggc
aatgaagtcgatggtatgtctcggcccctgaggcctcggccccggaaagagcctggagat
gaagaagaggtagacctgattcagaactccagtgacgatgaaggtgacgaagccggggac
ctggcctcggtgtcctccaccccgcctatgcggccccagatcacagacaggaactatttc
cacctgccctacctggagcacaagccctgcatctatatcaagagctggtggcctgaccag
aggcggcgcctctacaatgccaacatcatggaccacattgctgacaagctggaagaaggc
ctgaatgatgtacaggagatgatcaaaacggagaagtcctacccggagcgccgcctgcgg
ggtgtgctagaggaactcagctgtggctgccaccgcttcctctccctctcagacaaggac
cagggccgctcgtcccgcaccaggctggatcgggagcgtcttaagtcctgtatgagggag
ctggagagcatgggacaacaggccaagagcctgagggctcaggtgaagcggcacactgtt
cgggacaagctgaggttatgccagaactttctacagaagctacgcttcctggcagatgag
ccccagcacagcattcctgatgtgttcatttggatgatgagcaacaacaaacgtatcgcc
tatgcccgcgtgccttccaaagacctgctgttctccatcgtggaggaggaactgggcaag
gactgcgccaaagtcaagaccctcttcctgaagctgccagggaaaaggggcttcggctcg
gcaggctggacagtacaggccaagctggagctctacctgtggctgggcctcagcaagcag
cgaaaggacttcctgtgtggtctgccctgtggcttcgaggaggtcaaggcagcccaaggc
ctgggcctgcattcctttccgcccatcagcctagtctacaccaagaagcaagccttccag
ctccgagcacacatgtatcaggcccgaagcctctttgctgctgacagcagtgggctctct
gatcccttcgcccgtgtcttcttcatcaaccaaagccaatgcactgaggttctaaatgag
acactgtgtcccacctgggaccagatgctggtatttgacaacctggagctgtacggtgaa
gctcacgagttacgagatgatccccccatcattgtcattgaaatctacgaccaggacagc
atgggcaaagccgacttcatgggccggaccttcgccaagcccctggtgaagatggcagat
gaggcctactgcccacctcgcttcccgccgcagcttgagtactaccagatctaccgaggc
agtgccacagccggagacctactggctgccttcgagctgctgcagattgggccatcaggg
aaggctgacctgccacccatcaatggcccagtggacatggacagagggcccatcatgcct
gtgcccgtgggaatccggccagtgctcagcaagtaccgagtggaggtgctattctggggc
ctgagggacctaaagagggtgaacctggcccaggtggaccgaccacgggtggacatcgag
tgtgcaggaaagggggtacaatcctccctgatccacaattataagaagaaccccaacttc
aacaccctggtcaagtggtttgaagtggacctcccagagaatgagctcctgcacccaccc
ttgaacatccgagtggtagattgccgggcctttggacgatacaccctggtgggttcccat
gcagtcagctcactgaggcgcttcatctaccgacctccggaccgctcagcccccaactgg
aacaccacagtcaggctgctccggggctgccacaggctgcgcaatgggggcccctcttct
cgccccacaggggaggttgtagtaagcatggagcctgaggagccagttaagaagctggag
accatggtgaaactggatgcgacttctgatgctgtggtcaaggtggatgtggctgaagat
gagaaggaaaggaagaagaagaaaaagaaaggcccgtcagaggagccagaggaagaggag
cctgatgagagcatgctggattggtggtccaagtacttcgcctccatcgacacaatgaag
gagcaacttcgacaacatgagacctctggaactgacttggaagagaaggaagagatggaa
agcgctgagggcctgaagggaccaatgaagagcaaggagaagtccagagctgcaaaggag
gagaaaaagaagaaaaaccagagccctggccctggccagggatcggaggctcctgagaag
aagaaagccaagatcgatgagcttaaggtgtaccccaaggagctggaatcggagtttgac
agctttgaggactggctgcacaccttcaacctgttgaggggcaagacgggggatgatgag
gatggctccacagaggaggagcgcatagtaggccgattcaagggatccctctgtgtgtac
aaagtgccactcccagaggatgtatctcgagaagctggctatgaccccacctatggaatg
ttccagggcatcccaagcaatgaccccatcaatgtgctggtccgaatctatgtggtccgg
gccacagacctgcacccggccgacatcaatggcaaagccgacccctatattgccatcaag
ttaggcaagaccgacatccgagacaaggagaactacatctccaagcagctcaaccctgtg
tttgggaagtcctttgacattgaggcctccttccccatggagtccatgttgacagtggcc
gtgtacgactgggatctggtgggcactgatgacctcatcggagaaaccaagatcgacctg
gaaaaccgcttctacagcaagcaccgcgccacctgcggcatcgcacagacctattccata
catggctacaatatctggagggaccccatgaagcccagccagatcctgacacgcctctgc
aaagagggcaaagtggacggcccccactttggtccccatgggagagtgagggttgccaac
cgtgtcttcacggggccttcagaaatagaggatgagaatggtcagaggaagcccacggat
gagcacgtggcactgtctgctctgagacactgggaggacatcccccgggtgggctgccgc
cttgtaccggaacacgtggagaccaggccgctgctcaaccctgacaagccaggcattgag
cagggccgcctggagctgtgggtagacatgttccccatggacatgccagcccctgggaca
cctctggatatatcccccaggaaacccaagaagtacgagctgcgggtcatcgtgtggaac
acagacgaggtggtcctggaagatgatgatttcttcacgggagagaagtccagtgatatt
tttgtgagggggtggctgaagggccagcaggaggacaaacaggacacagacgtccactat
cactccctcacgggggagggcaacttcaactggagatacctcttccccttcgactaccta
gcggccgaagagaagatcgttatgtccaagaaggagtctatgttctcctgggatgagaca
gagtacaagatccctgcgcggctcaccctgcagatctgggacgctgaccacttctcggct
gacgacttcctgggggctatcgagctggacctgaaccggttcccgaggggcgctaagaca
gccaagcagtgcaccatggagatggccaccggggaggtggatgtacccctggtttccatc
tttaaacagaaacgtgtcaaaggctggtggcccctcctggcccgcaatgagaatgatgag
tttgagctcacaggcaaagtggaggcggagctacacctactcacggcagaggaggcagag
aagaatcctgtgggcctggctcgcaatgaacctgatcccctagaaaaacccaatcggccc
gacacaagcttcatctggttcttgaaccctctcaagtctgcccgctacttcctgtggcat
acctaccgctggctactcctcaaactcctgctgctcttcctcctgctgctgctcttcgcc
ctgtttctctactctctgcctggctacctggccaagaagatcctcggggcctga
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