Mus caroli (Ryukyu mouse): 110295349
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Entry
110295349 CDS
T05910
Symbol
Cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04260
Cardiac muscle contraction
mcal04261
Adrenergic signaling in cardiomyocytes
mcal04921
Oxytocin signaling pathway
mcal05410
Hypertrophic cardiomyopathy
mcal05412
Arrhythmogenic right ventricular cardiomyopathy
mcal05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110295349 (Cacna2d1)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
110295349 (Cacna2d1)
09153 Circulatory system
04260 Cardiac muscle contraction
110295349 (Cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
110295349 (Cacna2d1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
110295349 (Cacna2d1)
05412 Arrhythmogenic right ventricular cardiomyopathy
110295349 (Cacna2d1)
05414 Dilated cardiomyopathy
110295349 (Cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110295349 (Cacna2d1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110295349 (Cacna2d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
110295349
NCBI-ProteinID:
XP_021019526
Ensembl:
MGP_CAROLIEiJ_G0026972
UniProt:
A0A6P5PSF5
LinkDB
All DBs
Position
5:11244004..11663597
Genome browser
AA seq
1091 aa
AA seq
DB search
MAAGCLLALTLTLFQSGLIGPSSEEPFPSPVTIKSWVDKMQEDLVTLAKTASGVTQLADI
YEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLAMEAEKVQAAHQWREDFASN
EVVYYNAKDDLDPERNESEPGSQRIKPVFIEDANFGRQISYQHAAVHIPTDIYEGSTIVL
NELNWTSALDEVFKRNRDEDPTLLWQVFGSATGLARYYPASPWVDNSRTPNKIDLYDVRR
RPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQD
VSCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIML
FTDGGEERAQEIFAKYNKDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIR
INTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVITGTLPVFNVTGQSENKTNLK
NQLILGVMGVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTL
DFLDAELENEIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSL
ALVLPTYSFYYIKAKLEETITQARSKKGKMKDSETLKPDNFEESGYTFIAPREYCNDLKP
SDNNTEFLLNFNEFIDRKTPNNPSCNTDLINRILLDAGFTNELVQNYWSKQKNIKGVKAR
FVVTDGGITRVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPYFNKSGPGAYESGI
MVSKAVELNIQGKLLKPAVVGIKIDVNSWIENFTKTSIRDPCAGPVCDCKRNSDVMDCVI
LDDGGFLLMANHDDYTNQIGRFFGEIDPSMMRHLVNISLYAFNKSYDYQSVCDPGAAPKQ
GAGHRSAYVPSIADILQIGWWATAAAWSILQQLLLSLTFPRLLEAVEMEEDDFTASLSKQ
SCITEQTQYFFKNDTKSFSGLLDCGNCSRIFHVEKLMNTNLVFIMVESKGTCPCDTRLLM
QAEQTSDGPDPCDMVKQPRYRKGPDVCFDNNVLEDYTDCGGVSGLNPSLWSIFGLQFILL
WLVSGSRHYLL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctgcctgctggccttgactctgacacttttccaatctgggctgatcggc
ccctcgagcgaggagcccttcccttcgcccgtcactatcaagtcatgggtggacaagatg
caagaagaccttgtcacactggcaaaaacagcaagtggagtgactcagcttgctgatatt
tatgaaaaataccaagatttgtataccgtggagcccaataatgcacgccaactggttgaa
attgcagcccgagacattgagaagcttctaagcaaccgatcgaaggccctggtgcgcctg
gctatggaagcagagaaagtccaagcagcccaccaatggagggaagattttgcaagcaat
gaagttgtctactataatgctaaggatgatcttgatcctgaaagaaatgagagtgagcca
ggcagccaacggattaaacctgtttttattgaagatgctaattttggacgtcagatatcc
tatcagcatgcagcggtccatatccccacggacatctatgagggctcaaccatagtgtta
aacgagctcaactggacaagtgccttagatgaagtattcaaaagaaatcgagatgaagac
cctacactgctgtggcaagtgtttggcagtgccactggcctggcccggtattatccagct
tctccatgggtggataatagtagaactccaaacaagattgatctatatgatgtacgaaga
agaccatggtacatccagggagctgcatcccccaaggacatgctcattctggtggacgtg
agtggaagtgtgagcggattgactctgaaactcatccgaacatctgtctccgagatgtta
gaaaccctctctgatgatgatttcgtgaatgtagcttcatttaacagcaacgctcaggat
gtaagctgtttccagcacctggttcaagcaaacgtaagaaataagaaggtgttgaaagat
gccgtgaataacattacagcaaaggggatcacagattacaagaaaggctttagctttgcc
ttcgaacagctacttaattataatgtttccagagctaattgcaataagattatcatgtta
ttcacggatggaggagaagagagagcccaggagatatttgccaaatacaataaagacaaa
aaagtccgtgtgtttacattttccgtcggtcaacataattatgacagaggacctattcag
tggatggcttgtgaaaataaaggttactattatgagattccctccattggtgcaataaga
atcaatactcaggaatatctagatgttctgggaagaccaatggttttagccggtgacaaa
gcgaagcaagttcaatggacaaatgtgtatttggatgccctggaactgggacttgtcatt
actggaactctaccggtcttcaacgtcactggccaatctgaaaataagacaaacttgaag
aaccagctgattcttggtgtgatgggcgttgatgtgtctctggaagatatcaagagattg
acaccacgttttacactctgtcccaatggctactattttgcaattgatcctaatggctat
gtcttattgcatccaaatcttcagccaaagaaccccaaatctcaggagccagtcacactg
gatttcctcgatgctgagttagagaatgaaattaaagtggagattcgaaataaaatgata
gatggagaaagtggagaaaaaacgttcagaactctggtcaagtctcaagatgagagatac
attgacaaaggaaatcgaacatacacatggacacctgtcaatggcacagattacagtttg
gccttggtattgccaacctacagtttttactatataaaagccaaactagaagagacaata
actcaggccagatcaaaaaagggaaaaatgaaggattcagaaaccctgaagccagacaat
tttgaagaatctggctatactttcatcgcaccaagggaatactgcaatgatcttaaacct
tcagataataacactgaatttcttttgaatttcaatgaatttattgataggaaaactcca
aacaacccctcctgtaatacagatttgattaatagaatcttgctggatgcaggttttaca
aatgaacttgtccaaaattattggagtaagcagaaaaatattaaaggagtgaaggcacgc
tttgtggtgacagacggtgggattacgagagtttatcctaaagaggctggagaaaattgg
caagagaacccagagacgtatgaggacagcttctacaaacggagcctagataacgataac
tatgttttcactgcgccctactttaacaaaagtggacccggtgcgtatgaatctggaatt
atggtaagcaaagctgtagaactgaatatccaaggaaaacttcttaagcctgcagttgtg
ggaattaaaattgatgtaaattcctggatagaaaattttaccaaaacttcaatcagggat
ccgtgtgctggtccagtttgtgactgcaaaagaaacagtgatgtaatggactgtgtcatt
ctagatgatggtggatttcttttgatggcaaatcacgatgattacactaatcagattggg
cgtttttttggagagattgacccaagcatgatgagacacctggttaatatatcactttat
gcattcaacaagtcatacgactaccagtcagtgtgcgacccgggggcggcaccaaagcag
ggggcaggacatcgctcagcatacgtgccatcgattgcagatatactgcagattggctgg
tgggccactgctgccgcctggtctattctccagcagctgctcttgagtttgacctttcca
cggctccttgaggcagttgagatggaggaagatgacttcacagcctccctgtctaagcag
agctgcatcacagaacaaacccagtacttcttcaagaacgatactaaatcattcagtggt
ttactggactgtggaaactgttccaggatctttcatgtagagaaacttatgaacaccaac
ttagtattcatcatggtggagagcaaagggacatgtccgtgtgacacgcggctgctcatg
caggcggaacagacttctgatggtccagatccttgcgacatggtcaagcagcccagatac
cgaaaaggacctgatgtctgctttgataacaatgtgctggaggattataccgactgtggt
ggtgtttctgggttaaacccttctttatggtctatctttggactccagtttatactcctt
tggctggtatctggcagcagacactacctactgtga
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