KEGG   Mus caroli (Ryukyu mouse): 110296032
Entry
110296032         CDS       T05910                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X2
  KO
K10031  C-X-C motif chemokine 12
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04060  Cytokine-cytokine receptor interaction
mcal04061  Viral protein interaction with cytokine and cytokine receptor
mcal04062  Chemokine signaling pathway
mcal04064  NF-kappa B signaling pathway
mcal04360  Axon guidance
mcal04670  Leukocyte transendothelial migration
mcal04672  Intestinal immune network for IgA production
mcal04810  Regulation of actin cytoskeleton
mcal05163  Human cytomegalovirus infection
mcal05200  Pathways in cancer
mcal05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    110296032 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110296032 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110296032 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110296032 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    110296032 (Cxcl12)
   04672 Intestinal immune network for IgA production
    110296032 (Cxcl12)
   04062 Chemokine signaling pathway
    110296032 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    110296032 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110296032 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    110296032 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    110296032 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mcal04052]
    110296032 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:mcal00536]
    110296032 (Cxcl12)
Cytokines and neuropeptides [BR:mcal04052]
 Cytokines
  Chemokines
   110296032 (Cxcl12)
Glycosaminoglycan binding proteins [BR:mcal00536]
 Heparan sulfate / Heparin
  Chemokines
   110296032 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 110296032
NCBI-ProteinID: XP_021020183
Ensembl: MGP_CAROLIEiJ_G0028780
UniProt: A0A6P5PTX8
LinkDB
Position
6:112232682..112245529
AA seq 93 aa
MDAKVVAVLALVLAALCISDGKPVSLSYRCPCRFFESHIARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNKRLKM
NT seq 282 nt   +upstreamnt  +downstreamnt
atggacgccaaggtcgtcgccgtgctggccctggtgctggccgcgctctgcatcagtgac
ggtaaaccagtcagcctgagctaccgatgcccctgccggttcttcgagagccacatcgcc
agagccaacgtcaagcatctgaaaatcctcaacactccaaactgtgcccttcagattgtt
gcaaggctgaagaacaacaacagacaagtgtgcattgacccgaaattaaagtggatccaa
gagtacctggagaaagctttaaacaagaggctcaagatgtga

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