KEGG   Mus caroli (Ryukyu mouse): 110296155
Entry
110296155         CDS       T05910                                 
Symbol
Ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcal03037]
    110296155 (Ift122)
Cilium and associated proteins [BR:mcal03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   110296155 (Ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_CAF1B_HIR1 TPR_GEMI5 WD40_MABP1-WDR62_2nd TPR_IF140-IFT172 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR19_1st TPR_IFT80_172 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd B-prop_COPA_B_2nd WD40_MABP1-WDR62_1st TPR_7 eIF2A Beta-prop_IFT140_2nd TPR_COPA_B Beta-prop_SPT8 Beta-prop_WDR75_1st CENP-B_dimeris
Other DBs
NCBI-GeneID: 110296155
NCBI-ProteinID: XP_021020376
Ensembl: MGP_CAROLIEiJ_G0028761
UniProt: A0A6P5Q1K0
LinkDB
Position
6:110953114..111021829
AA seq 1242 aa
MRAVLTWRDKAEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMANGIISIRNKNGEEKVKIERPGGSLSPIW
SICWNPSSRWETIWMSRENEDAEDVIVNKYVQEIPSILKSTVYNSQGSEAEEEEQEEEDD
SPRDGNSEEHNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGGS
DKQVSLFTKDGVRLGTVGEQNSWVWTCRVKPDSNYVVVGCQDGTISFYQLIFSTVHGLYK
DRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSEDST
DMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIG
GPAGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCLV
YDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNGS
KIFCLHVFSMSAVEVPQSAPMYQYLDRKMFKEAYQIACLGVTDADWRELAMEALEGLEFE
TARKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHES
LALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHAKA
IEISGSHGWVDMLIDIARKLDKAEREPLLMCACYFKKLDSPGYAAETYLKIGDLKSLVQL
YVDTKRWDEAFALGEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLEQ
LTHNAVVESRFNDAAYYYWMLSMQCLDMAQADPAQKDAMLDKFHHFQHLAELYHGYQTIH
RYTEEPFSFDLPETLFNISKFLLHSLTKATPLGISKVNTLFTLAKQSKALGAYKLARHAY
DKLRGLQIPARIQKSIELGTLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQ
PFIFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRHKREGKWRETSSNNSQTLKLDE
TMDSIGEDDPFTAKLSFEQGSSEFVPVVVNRSVLRSMSRRDVLIKRWPPPLQWQYFRSLL
PDASITMCPSCFQMFHSEDYELLVLQHACCPYCRRRIDDTGP
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgagggccgtgttgacgtggagagacaaagcggagcagtgtatctacgacctcgcattt
aagcctgatggaacacaactgattctggctgcaggaaacagattgctggtttatgacacc
tctgatggcaccttacttcaacccctgaagggacacaaagacaccgtgtactgtgtggcg
tatgcaaaggatggcaagcgctttgcatctggatctgccgacaagagcatcattatctgg
acctcaaaacttgaaggcattctgaagtacacgcacaatgactctatacagtgtgtctcc
tacaatcctgttacccaccagctggcatcttgttcctccagtgactttgggttgtggtct
cctgagcagaagtctgtgtccaagcacaaatccagcagcaagatcacgtgctgcagctgg
acaaacgatggtcagtacctggctctgggcatggccaatggcatcatcagtatacggaac
aagaatggtgaagagaaagtgaagatcgagcgccctgggggctccctctccccaatatgg
tccatctgctggaacccttcaagccgatgggagactatctggatgagcagagagaacgag
gatgctgaggatgtcattgtcaacaaatatgttcaggaaatcccttccattctgaagtca
acagtgtacaatagtcagggtagtgaggcagaggaggaagagcaagaggaagaggacgac
agtcccagggacggcaactcagaggaacataatgacatcctggctgtagctgactgggga
cagaaactttccttctaccagctgagtggaaaacagattgggaaggatcggccactgaac
tttgacccctgttgcatcagctacttcactaaaggagagtacattttggtggggggttca
gacaagcaggtatctcttttcaccaaggatggagtgcgactggggaccgttggggagcag
aactcctgggtgtggacctgtagagtgaaacctgactccaattatgtggtggtcggctgc
caggatggcaccatctccttctaccagctcatcttcagcacagtccatgggctctacaag
gatcggtatgcctacagggacagcatgacagacgtcatcgtgcagcacctcatcacagag
cagaaagttaggattaagtgcagagagcttgtcaagaaaattgccatctacaaaaatcga
ttagctatccagctgccagagaagatcctcatctacgagctgtactctgaagactcgaca
gacatgcactaccgggtaaaggagaaaattgtcaagaagtttgagtgcaacctgctggtg
gtgtgtgctgaccacatcatcctgtgccaggaaaaacggctacagtgcctgtccttcagt
ggagtgaaggaaagggaatggcagatggagtctctcatccgctacatcaaggtgatcggt
ggccctgctggaagagaaggtctgttggtaggcctgaaaaatggccagatcctgaagatc
tttgtggacaatctttttgctattgtcctgctgaagcaggccacagccgtgcgctgcctg
gacatgagtgcctcccggaacaagctggctgtggtggatgagaatgacacgtgcctggtg
tacgacatccacacgaaggagctgctattccaggaaccgaatgccaacagcgtggcctgg
aacacacagtgtgaggacatgctctgcttctctggaggaggctacctcaacatcaaggcc
agcaccttcccagtgcaccagcagaagctgcagggctttgtggttggctacaacggctcc
aagatcttctgccttcatgtcttctctatgtctgccgtggaggtgccacagtctgctcca
atgtaccagtacctcgataggaagatgttcaaagaagcataccagatcgcttgcttggga
gtgacagacgctgattggcgtgaactggccatggaagctctagaaggactagagtttgag
acggcaaggaaggccttcaccagagtccaggaccttcgatacctagaactgatcagcagt
attgaggagaggaagaagaggggagagaccaacaatgacctgtttctggcagatgtgttt
tcctaccaggggaagttccatgaagccgccaaactgtacaagaggagcgggcatgagagc
ctcgctctcgacatgtatactgacctctgcatgtttgagtacgccaaggatttccttggg
tctggagaccctaaagagacgaagatgctcatcaccaagcaggccgactgggccagaaac
atcaatgagcccaaagctgcagtggagatgtacatctcagcaggggagcacgccaaggcc
atagagatcagcggcagccatggctgggtggacatgttgatagacattgctcggaagctg
gacaaggctgaacgggagcccctgctcatgtgtgcttgctactttaagaagctggacagt
cctggctatgctgctgaaacctacctgaagatcggggacctgaagtctctggtgcagctg
tatgtggacaccaagcgctgggatgaggcctttgcattaggtgagaagcacccggagttc
aaggatgacgtctacgtgccctacgcgcagtggctggcggagaatgaccgctttgaggaa
gcccagaaagccttccacaaggccgggaggcagggagaagcagtccgggtgctggagcag
ctcacgcacaatgctgtggtggagagcaggtttaacgacgctgcctattattactggatg
ctgtccatgcagtgcctcgacatggctcaagcagatcctgcccagaaggacgcgatgctg
gacaagtttcaccacttccagcacctggctgagctgtaccatggctatcaaaccattcac
cgatacacggaggagccattcagctttgacctccccgaaaccctcttcaacatctccaag
ttcttgctgcacagtctgaccaaggccacccccttgggcatctccaaagtgaatacactc
ttcacactggctaagcagagcaaggctctgggtgcttacaagttggcccggcatgcctat
gacaagctacggggactgcagatccccgccaggatccagaagtccattgagctgggcacc
ctgaccatccgctccaagcccttccatgacagtgaggagctggtacccttgtgctaccgc
tgttctaccaacaacccgctgctgaacaaccttggcaacgtctgcatcaactgccgccag
cccttcatcttctccgcctcttcctatgaggtgctgcacctggtggaattctacctggaa
gaggggatcactgacgaagaagctgttgccctcatcgatctggaggcaccaagacacaag
agggagggcaagtggcgagagacctcaagcaacaattcccagacgttgaagctggacgag
accatggactccataggagaagatgacccatttacagccaagctgagctttgagcaaggt
agctctgagtttgtgcctgtggtggtgaaccggtcagtactacgctccatgagccgaagg
gatgttctcatcaagcgctggcccccgccgctgcaatggcaatatttccgctcgctgttg
cctgatgcctccatcaccatgtgcccctcctgctttcagatgttccattcagaggactac
gaactgcttgtgctccagcacgcctgctgcccttactgccgaaggcgtatcgatgacact
ggcccgtga

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