Mus caroli (Ryukyu mouse): 110296202
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Entry
110296202 CDS
T05910
Symbol
Plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
110296202 (Plxnd1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
110296202
NCBI-ProteinID:
XP_021020450
Ensembl:
MGP_CAROLIEiJ_G0028764
UniProt:
A0A6P5PX56
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All DBs
Position
6:complement(111049398..111089606)
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AA seq
1925 aa
AA seq
DB search
MARRAAGGAPPSARAAAAVPLRPRPHSRGPGLLPLPLLLLLGAAQAGALEIQRRFPSPTP
TNNFALDGTAGTVYLAAVNRLYQLSSANLSLEAEATVGPVPDSPLCHAPQLPQASCEHPR
RLTDNYNKILQLDPGQGLVVACGSIYQGLCQLRRRGNISALAVSFPPAAPTAEPVTVFPS
MLNVAANHPNASTVGLVLPPTSGTGGSRLLVGATYTGFGSAFFPRNRSLEDHRFENTPEI
AIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKEQHKLGFVRAFLHPAVPPHSAQPYAY
LALNSEARAGDKDSQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGDLYSRL
VSVFPAREQFFAVFERPQGAPGARNAPAALCAFRFDDVQAAIRAARTACFVEPAPDVVAV
LDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQPLRASPVFRAPGLTAVAVAS
ANNYTAVFLGTATGRLLKISLNESMQVVSRRVLTVAYGEPVHHVMQFDPMDPGYLYLMTS
HQMARVKVAACEVHSTCGDCVGAADAYCGWCTLETRCTLQQDCTNSSQPHFWTSASEGPS
RCPAMTVLPSEIDVHRDYTGMILQISGSLPSLSGMEMACDYGNGVRTVARVPGPAYDHQI
AYCNLLPRAQFPSFPAGQDHVTVEMSVRVKGHNIVSANFTIYDCSRIGQVYPHTACTSCL
STQWPCSWCIQLHSCVSNQSQCQDSPNPTSPQDCPQILPSPLAPVPTGGSQDILVPLTKA
TFFHGSSLECSFGLEESFEAVWANNSLVRCNQVVLHTTQKSQVFPLSLKLKGPPDRFLDS
PNPMTVVVYNCAMGSPDCSQCLGREDLGHLCVWNEGCRLRGPLQPLPGTCPAPEIRVIEP
LSGPLDGGTLLTIRGRNLGRRLSDVAHGVWIGSVACEPLADRYTVSEEIVCATGPAAGAF
SDVVTVNVSKEGRSREQFSYVLPTVHSLEPSMGPKAGGTRITIHGSDLNVGSMLQVLVND
TDPCTDLTRTATSITCTVPGGSLPSPVPVCVRFESRGCVHGNLTFRYMQNPVITAISPGR
SPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTFCKVLNSTLITCPSPGALSNASAPVD
FFINGRAYADEAAEELLDPAEAQRGSRFRLDYLPNPQFSTAKREKWIKHHPGEPLTLVIH
KEQDSLGLESHEYHIKIGQVSCDIQIISDRVIHCSVNESLGTAEGQLPITIQVGNFNQTI
ATLQLGGSETAIVVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIRE
EIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSKTLNS
QGGSPPQETHPLLGEWNIPEHCRPSMEEGISLFSSLLNNKHFLIVFVHALEQQKDFAVRD
RCSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSI
CMYGCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNV
SFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSYVL
RDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDSTLGRVKDLDTEKYFHLVLPT
DELVEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYF
FDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQ
AFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHLAEE
SRKYQNEFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMENNIYE
CYSEA
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcgccgcgggcggcgcaccccctagcgcccgggccgccgcggccgtcccc
ttgcgtccgcgccctcactcgcggggccctggtctgctgccgctgcctctgctgctgctg
ctcggggcggcacaggccggcgccctagagatccagcgccgtttcccctcgcccacgccc
accaacaacttcgccctggacggcacagcgggcaccgtgtacttggcggcagtgaaccgc
ctgtaccaactgtcgagtgccaacttgagcctggaagccgaggcgaccgtgggtcctgtg
ccggacagcccgctgtgtcacgccccgcagctcccgcaggcctcgtgcgagcacccgcgg
cgcctcacggacaactacaacaaaatcctgcagttggacccgggccagggtctggtggtc
gcgtgcggctccatctaccagggtctgtgccagctgaggcgccggggcaacatctcagcc
ctggccgtgagctttccgcctgccgcgccgaccgcagaaccggtcaccgtgttccccagc
atgctcaacgtggccgccaaccaccccaacgcgtccactgtgggactggtgctgccgccg
acctcgggcaccgggggcagccgtctgctcgtgggcgccacgtacaccggcttcggcagc
gctttcttcccgcgcaaccgtagcctagaagaccaccgcttcgagaacacgcccgagatc
gctatccgctccctggacgcgcgtggagacttggccaagctcttcaccttcgatctcaac
ccgtcggacgataacatcctgaagatcaagcagggcgccaaggagcagcacaagctgggc
ttcgtgcgtgccttcttgcacccggcggtgccacctcacagcgcgcagccctacgcgtac
ctggcgctcaacagcgaggcgcgtgcgggcgacaaggacagccaggcgcgcagcctgctg
gcgcgcatctgcctgccccgcggcgcgggtggcgacgccaagaagctcacagagtcctac
atccaactgggcttgcagtgcgcgggcggcgcgggccgcggcgacctctacagccgcctc
gtgtcggtcttccccgcgcgcgagcagttcttcgccgtcttcgagcggccccagggcgcc
ccaggtgcccgcaacgccccggccgcgctctgcgccttccgcttcgacgacgtgcaggct
gccattcgtgcagcgcgcaccgcctgcttcgtggagccggcgcccgacgtggtggcggtg
ctggacagtgtggtgcagggcaccgggccggcctgcgagagcaagcgcaacatacagctg
cagccagagcagctggattgtggagcggcccacctgcagcacccactgaccatcctgcag
ccgctgagggcatcgcccgtgttccgtgctccagggctcacggccgtggctgtggccagt
gccaacaactacacggccgtctttctgggcaccgccacggggaggctccttaagatcagc
ttgaatgagagcatgcaggtagtaagcaggcgagtgctaactgtagcctatggggagcct
gtgcaccacgtcatgcagtttgaccccatggatcctggttacctatacctgatgacatcc
caccagatggcccgagtgaaggtggcagcgtgtgaggtacactccacctgcggggactgc
gtgggtgcggccgatgcctactgtggttggtgcactctggagacccggtgcacactccag
caggattgcaccaactccagccagccacatttctggaccagtgccagtgagggccccagc
cgctgccctgccatgacagtactgccctcggagattgatgtgcaccgggactacacaggt
atgatcttacagatttcaggaagcctgcccagccttagcggcatggagatggcttgtgac
tatggaaatggcgttcgaacggtggcccgggtacctggccctgcctatgatcatcagatt
gcctactgcaatctcctgcccagggcccagtttccatcctttcctgctggccaggaccac
gtgactgttgagatgtctgtaagggtcaaaggacacaacattgtctcagccaatttcacc
atctacgactgcagccgaattggacaagtctacccccatacagcctgtaccagctgccta
tccacacagtggccttgctcctggtgcatccagctgcattcatgtgtctccaaccagtct
cagtgccaggactcgccaaaccccacgagtcctcaggactgtccccagatcctgccctcg
cccctagcgcccgtgcccacaggtggctcccaagacatcctggtgcccctgactaaagcc
accttcttccatggttcctccctcgagtgcagctttgggctggaagagagctttgaggct
gtatgggcgaataactcactggtccgctgcaaccaagtggtgctgcacacaacccagaag
agccaggtatttccactgagtctgaagctgaaggggccgccagaccgattcctagacagc
cctaaccccatgacagttgtggtctacaattgtgctatgggcagccctgactgttcccag
tgcctgggccgtgaggacctgggtcacctctgtgtttggaatgagggctgtcgtctaaga
gggcccctgcagccactccctggcacctgcccagctcctgaaatccgagtgattgagcct
ctgagtggccccttggatggtgggaccttgctgaccatccgtggcaggaacctgggccgt
cggctcagtgacgtggcacatggtgtgtggattggcagtgtggcctgtgaacccctggct
gacagatacaccgtttcagaagagatcgtgtgtgccacagggcccgccgcaggggccttc
tcagacgtggtaaccgtgaacgtctccaaggaaggcaggtctcgggaacagttctcctat
gtgctgcccacggtccactcgctggagccttccatgggcccaaaggccgggggcacaagg
atcaccattcacggcagtgacctcaacgtgggctctatgctccaggtcctggtgaatgac
acggacccctgcacagatcttacgcgcacagccaccagcatcacctgcactgtgccaggc
ggttccctgccctctccagtgcctgtgtgtgtgcgcttcgagagccggggctgcgtgcac
ggaaacctcaccttccggtacatgcagaacccagtcatcacagccatcagcccaggccgc
agccctgtcagtggcggcaggaccatcactgtggctggcgaacgcttccacatggtacag
aatgtatcaatggctgtacaccacattggccgggagcccacgttctgcaaggttctcaac
tccacactcatcacctgcccatctcctggagccctgagcaatgcttcggcgcctgtagac
ttcttcatcaatggccgggcatatgcagacgaggcggccgaggagctgctggaccctgca
gaggcacagaggggcagccggttccgcctagactacctccccaacccacagttctccaca
gccaagagggagaagtggatcaaacatcacccaggagagccactcacccttgtcatccat
aaggagcaagacagcctggggctggagagccatgagtaccacatcaagattggccaggtg
tcctgcgacatccagatcatctcagacagagtcatccactgctcagtcaatgagtcactg
ggcacggctgaaggacagctgcccatcacaatccaggtggggaacttcaaccagaccatt
gccacactgcaactggggggcagcgagacggccattgtggtgtccatcgtcatctgcagt
gtcctgttgctgctgtctgtggttgctctgttcgtcttctgcaccaagagccgccgtgcc
gagcgctactggcagaagaccctgctgcagatggaagagatggagtctcagatccgagaa
gagatccgtaaaggctttgcggagctgcagacagacatgacggatctcaccaaggagctg
aaccgcagccagggcatccccttcttggagtataagcactttgtgactcgaaccttcttc
cccaagtgctcttccctctatgaagagcggtatgtgctgccctcgaagaccctcaactcc
cagggtggctccccgccacaggaaacccacccactactgggagagtggaacatccctgaa
cactgtcggcccagcatggaggaggggatcagcctgttctcctcactgctcaacaacaag
cacttcctcattgtcttcgtccatgctctggagcagcagaaggacttcgcagtgcgtgac
aggtgcagcctggcatccctgctgaccatcgcgctgcacggcaagctggagtactatacg
agcatcatgaaggagctgctcgtggacctcattgacgcctcggcggccaagaaccccaag
ctcatgttgcggcgcacggagtctgtggtggagaagatgcttaccaactggatgtccatc
tgcatgtacggctgcctgagggagacagtaggtgagccgttcttcctgctgttgtgcgcc
atcaagcagcagatcaacaaaggctccatcgatgccatcacaggcaaagcccgctacaca
ctcaacgaggagtggctgctgagggagaacattgaggccaagccccggaacctgaacgtg
tccttccagggctgtgggatggactccctcagcgtgcgggccatggacaccgacacactg
acgcaggtgaaggagaagatcctggaagccttctgcaagaacgtcccctactcacagtgg
ccgcgggcggaggacgtggacctcgaatggtttgcctcgagcacccagagctacgtcctc
cgggacctggatgacacatcagtggtggaggacggccgtaagaaactgaacacgctggcc
cactacaagatacctgagggcgcctccctagccatgagcctcacagacaagaaggacagt
accctgggcagagtgaaagacttggacacagaaaagtatttccatttggtgctgcctacg
gatgagctggtagagcctaagaaatctcaccggcagagccaccgcaagaaagtattgccg
gagatctacctgacccgcctgctgtccaccaagggcacgctacagaagttcctagatgac
ctgttcaaggctatcctgagcatccgagaggacaagcccccgctggctgtcaagtatttc
tttgacttcctagaggaacaggcggagaagagaggcatctccgaccctgacaccctgcat
atctggaagaccaacagccttcccctgcgcttctgggtgaacatcttaaaaaatccccag
tttgtcttcgacatagagaagacggaccacatcgacgcttgcctgtctgtcattgcccag
gccttcatcgatgcctgctccatctctgacctgcagctgggcaaggactcacccaccaac
aagcttctgtacgcgaaggagatccctgagtaccggaagatcgtacagcgctattataaa
cagatccaggacatgacgccgctcagcgagcaggaaatgaacgcacacctggccgaggag
tctcggaaataccagaatgagttcaacacaaacgtggccatggctgagatttataaatat
gctaagaggtatcgaccacagatcatggctgccctggaggccaaccccactgcccgcagg
acccagctacagcacaagtttgaacaggtggtcgctctgatggaaaacaatatctatgag
tgttacagcgaggcctga
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integrated database retrieval system
