Mus caroli (Ryukyu mouse): 110296682
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Entry
110296682 CDS
T05910
Symbol
Phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X4
KO
K11456
polyhomeotic-like protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110296682 (Phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110296682 (Phc1)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
110296682 (Phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
110296682
NCBI-ProteinID:
XP_021021070
Ensembl:
MGP_CAROLIEiJ_G0028821
UniProt:
A0A6P5PYW4
LinkDB
All DBs
Position
6:complement(117250015..117272674)
Genome browser
AA seq
1008 aa
AA seq
DB search
METESEQNSSSTNGSSSSGASSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QLSNAQLHSLAAVQQATIAASRQASSPNSSTAQQQTATTQASMNLATTSAAQLISRSQSV
SSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPN
GAVAAVQQEVPPAQSPGVHADADQVQNLAVRNQQASAQGPQMPGSTQKAIPPGASPVSGL
SQTSSQALAVAQASSGASGQSLNLSQAGGGSGNSLPGSMGPGGGGQAPGGLGQLPSSGLT
GGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQSVGMNLTRTATPA
PSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHTATH
LQLSQQQQQQQQQQQQQQQQQQQQGTTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPML
QSSPLTLPPEPTSKPPIPIQSKPAVAPIKPPQLGAAKMSATQQPPPHIPVQVVGTRQPGS
AQAQALGLAQLAAAVPTPRGIPGAVQPGQAHLASSPPSSQAAPGALQECPPALAAGMTLA
PVQGTAHVVKGGPTASSPVVAQVPAAFYMQSVHLPGKAQTLAVKRKAESEEERDDLSALA
SVLPTKASPAAESPKVIEEKNSLGEKAEPVASLNANPPNSDLVALAPTPSAPPPTLALVS
RQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQFLKETEKPLQAGLPTGLNES
QSSGPLGGDSPSVELEKKANLLKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFR
LKRKKMKEFQEASYARVRRRGPRRSSSDIARAKIQGKRHRGQEDSSRGSDNSSYDEALSP
TSPGPLSVRAGHGERDLGNTITTPSTPELQGINPVFLSSNPSQWSVEEVYEFIASLQGCQ
EIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggagagtgagcagaactctagttcaaccaatgggagttccagctcaggggcc
agctctcggccccagatagcacagatgtccctgtatgaacggcaagcagtgcaggctctg
caagcactgcagcggcaacctaatgcggctcaatatttccaccagttcatgctccagcaa
cagctcagtaatgcccaactgcatagcctggcagctgtccagcaggccacgattgctgcc
agtcgtcaggctagctccccaaacagcagcactgcacagcagcagaccgctaccacccag
gcctcgatgaatcttgcaaccacgtcagctgctcagctcatcagccgatcgcagagtgtg
agctcccccagtgctaccaccctgacgcagtctgtgctgctggggaacaccacttcccca
cctctcaaccagtcccaggcccagatgtatctgcggccacagctgggcaacctgttgcag
gttaaccggaccttgggccggaatgtgcctcttgcctcccagctcatcctgatgcctaat
ggggcagtggctgcagtccagcaggaggtgccacccgctcagtctcctggagttcatgca
gatgcagatcaggtgcagaacttggcagtgaggaaccaacaggcttcagctcaaggaccc
caaatgccaggctccactcagaaggccatccctcctggagcttctcctgtttctggcctc
tcccagacttctagccaggccctagcggtggcccaggcttcttctggggcctcaggccag
tcactcaaccttagtcaagccggtggaggcagtgggaatagcctcccaggctccatgggt
ccaggtggaggtggccaggcgcctgggggtttaggtcagttgccttcttcaggattgact
ggtggaagctgtccccggaagggcacaggagtggtgcagcccttacctgcagctcaaaca
gtgactgtgagccaaggaagccaaacggaggcagaaagtgcagcagccaagaaggcagaa
gcagatgggagtggccagcagagtgtgggcatgaacctgactcggacagccacacctgcc
cccagccagacncttattagttcagccacatacacacagatccagccccattcactgatt
cagcaacagcagcagatccacctccagcagaagcaagtggtgatccagcagcagattgcc
atccaccaccagcaacagttccagcaccgccagtcccagctgcttcacacagccacacac
ctccagttgtcccagcagcagcagcagcagcagcaacagcagcaacaacagcaacagcag
cagcagcagcaaggaacaaccctcactgcccctcagccaccccaggtcccacctactcag
caggtcccaccttcccaatcacaacagcaagcccagactctggtggtccaacccatgctt
cagtcttcacccctgactcttccacctgaaccaacctctaaaccacccatccccattcag
tccaaacctgctgtagctcctatcaaacctcctcaactaggagctgctaagatgtcagct
acacagcagccaccaccacatatccctgtgcaagttgtcggtacccggcagccaggctca
gcccaagcacaggctttgggattagcacagctggctgctgctgtacctactccccgtgga
ataccaggagcagtccagcctggccaggctcatctggcctcctcgccaccttcatcacag
gcggctcctggtgcacttcaagaatgtcctcctgcattggctgctgggatgacccttgct
cctgtgcaggggacagcacatgtggtaaagggtgggcctacagcctcctctcctgttgtg
gcccaggtccctgctgctttctacatgcagtcggtgcacctgccgggtaaagcccagacc
ttggctgtgaaacgcaaagctgagtctgaggaggagagagatgacctctccgcattggcc
tctgtgcttcctacaaaggcctccccagcagcagagagtccaaaggtaatagaggagaag
aacagtcttggagagaaagctgaaccagtggccagtttgaatgctaatcctccaaacagt
gatctagtagccttggcccctaccccatcagcaccacctcctactctggccttggtgtcc
agacaaatgggtgactcaaaacccccacaggccattgtgaagccccagattctcacgcac
atcattgaaggctttgttatccaggaaggagcagagccttttccggtcggatgttctcag
ttcctgaaagaaactgagaagccactgcaggctggccttccgacagggctgaatgagagt
cagtcaagtggccctttggggggagacagcccctctgtagagttagagaagaaggcaaat
ctcctcaagtgtgagtactgtggcaagtacgccccagcagagcagtttcgaggctctaag
aggttctgctccatgacgtgtgcaaagaggtacaatgtgagctgtagccaccagttccgc
ttgaagaggaaaaaaatgaaggagtttcaggaagccagctatgcacgtgttcggaggcgc
ggaccccgccgcagctcctctgatattgctcgtgctaagatccagggcaagcgccatcgg
ggtcaagaggactctagccgaggatcagataattccagctatgatgaagcgctctctcca
acatctcctgggccactgtcagtaagagccgggcacggagaacgtgatctaggaaacacc
attacaacaccatccacgccagagttacagggcatcaatcccgtgttcttgtccagtaat
cctagccaatggagcgtcgaggaggtctacgagtttattgcttctctgcaaggctgccaa
gagattgcggaagagttccgttcccaggagattgatggacaggcccttttattacttaaa
gaagagcatcttatgagtgccatgaacatcaaactaggtcctgctctcaagatctgtgcc
aagatcaatgtcctcaaggagacctaa
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