KEGG   Mus caroli (Ryukyu mouse): 110296921
Entry
110296921         CDS       T05910                                 
Symbol
Cd4
Name
(RefSeq) T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03250  Viral life cycle - HIV-1
mcal03260  Virion - Human immunodeficiency virus
mcal04060  Cytokine-cytokine receptor interaction
mcal04514  Cell adhesion molecules
mcal04612  Antigen processing and presentation
mcal04640  Hematopoietic cell lineage
mcal04658  Th1 and Th2 cell differentiation
mcal04659  Th17 cell differentiation
mcal04660  T cell receptor signaling pathway
mcal05135  Yersinia infection
mcal05166  Human T-cell leukemia virus 1 infection
mcal05170  Human immunodeficiency virus 1 infection
mcal05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
mcal05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110296921 (Cd4)
   03260 Virion - Human immunodeficiency virus
    110296921 (Cd4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110296921 (Cd4)
   04514 Cell adhesion molecules
    110296921 (Cd4)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110296921 (Cd4)
   04612 Antigen processing and presentation
    110296921 (Cd4)
   04660 T cell receptor signaling pathway
    110296921 (Cd4)
   04658 Th1 and Th2 cell differentiation
    110296921 (Cd4)
   04659 Th17 cell differentiation
    110296921 (Cd4)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    110296921 (Cd4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    110296921 (Cd4)
   05170 Human immunodeficiency virus 1 infection
    110296921 (Cd4)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    110296921 (Cd4)
  09163 Immune disease
   05340 Primary immunodeficiency
    110296921 (Cd4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mcal04090]
    110296921 (Cd4)
CD molecules [BR:mcal04090]
 Proteins
  110296921 (Cd4)
SSDB
Motif
Pfam: CD4-extracel C2-set ig Tcell_CD4_C V-set Ig_3 I-set Ig_2 Receptor_2B4
Other DBs
NCBI-GeneID: 110296921
NCBI-ProteinID: XP_021021386
Ensembl: MGP_CAROLIEiJ_G0028859
UniProt: A0A6P5Q470
LinkDB
Position
6:complement(120560762..120586045)
AA seq 496 aa
MGGTCLQSLEPSYTHTCARSRVKEGLARGSDSHRLNETTMCRGISLRHLLLLQLQLSQLL
AVTQGKTLVLGKEGDSAELPCESSQKKITVFNWKFSDQRKILGQHGNGVLIRGGSPSQFD
RFDSKKGVWEKGSFPLVINKLKLEDSQTYICEVENRKEEVELWVFKVTFSPGTSLLQGQS
LTLTLDSNSKVSNPLTECKHKRGKVVSGSKVLSMSNLRVQDSDFWNCTVTLNQKKNWFGM
TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGRGELMWKAEKDSFFQSWISFSIKNK
EVSVQKSTKDLKLQLRETLPLTLKIPQVSLQFAGSGNLSLTLDKGTLHQEVNLVVMKVAQ
LNNTLTCEVMGPTSPQMRLTLKQENQEARVSEEQKVVQVMAPETGLWQCLLSEGEKVKMD
SRIQVLSRGANQTVFLAXVLGGSFGFLGFLVFCILCCVRCRHQQRQAARMSQIKRLLSEK
KTCQCPHRMQKTHNLI
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgggaggtacctgtttgcaaagtctcgagccctcatatacacacacctgtgcaagaagc
agagtgaaggaaggactggccagaggctcagattcccatcggctcaacgagaccaccatg
tgccgaggcatctctcttaggcacttgctgctgctgcagctgcagctgtcacaactccta
gctgtcactcaagggaagaccctggtgctggggaaggaaggagattcagcagaactgccc
tgcgagagttcccagaagaagatcacagtcttcaactggaagttctctgaccagaggaag
attctggggcagcatggcaatggtgtattaattagaggaggttcgccttcgcagtttgat
cgttttgattccaaaaaaggggtatgggagaaaggatcgtttcctctcgtcatcaataaa
cttaagttggaagactctcagacctatatctgtgaagtagagaacaggaaagaggaggtg
gagttgtgggtgttcaaagtgaccttcagtccgggtaccagcctgttgcaagggcagagc
ctgaccctgaccttggatagcaactctaaggtctctaaccccttgacagagtgcaaacac
aaaagggggaaagttgtcagtggntccaaagttctctccatgtccaacctgagggttcag
gacagcgacttctggaactgcaccgtgaccctaaaccagaaaaagaactggttcggcatg
acactctcagtgctgggttttcagagcacagctatcacggcttataagagtgagggagag
tcagcggagttctccttcccactcaactttgcagaggaaaacgggcggggagagctgatg
tggaaggcagagaaggattctttcttccagtcctggatctccttttccataaagaacaaa
gaggtgtccgtacaaaagtccaccaaggacctcaagctccagctgcgggaaacgctccca
ctcaccctcaagataccccaggtctcacttcagtttgctggttcgggcaacctgtctctg
actctggacaaagggacactgcatcaggaagtgaacctggtggtgatgaaagtggctcag
ctcaacaacactttgacctgtgaggtgatgggacctacctctccccagatgagactgacc
ctgaagcaggagaaccaggaggccagggtctctgaggagcagaaagtggtccaagtgatg
gcccctgagacagggctgtggcaatgtctactgagtgaaggtgaaaaggtcaagatggac
tccaggatccaggttttatccagaggggcgaaccagacagtgttcctggctgncgtgctg
gggggctctttcggctttctgggtttccttgtgttctgcatcctctgctgtgtcaggtgc
cggcaccaacagcgtcaggcagcacgaatgtctcagatcaagaggctcctcagtgagaag
aagacctgccagtgcccccaccggatgcagaagacccataatctcatctga

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