Mus caroli (Ryukyu mouse): 110296921
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Entry
110296921 CDS
T05910
Symbol
Cd4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03250
Viral life cycle - HIV-1
mcal03260
Virion - Human immunodeficiency virus
mcal04060
Cytokine-cytokine receptor interaction
mcal04514
Cell adhesion molecules
mcal04612
Antigen processing and presentation
mcal04640
Hematopoietic cell lineage
mcal04658
Th1 and Th2 cell differentiation
mcal04659
Th17 cell differentiation
mcal04660
T cell receptor signaling pathway
mcal05135
Yersinia infection
mcal05166
Human T-cell leukemia virus 1 infection
mcal05170
Human immunodeficiency virus 1 infection
mcal05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
mcal05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110296921 (Cd4)
03260 Virion - Human immunodeficiency virus
110296921 (Cd4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110296921 (Cd4)
04514 Cell adhesion molecules
110296921 (Cd4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
110296921 (Cd4)
04612 Antigen processing and presentation
110296921 (Cd4)
04660 T cell receptor signaling pathway
110296921 (Cd4)
04658 Th1 and Th2 cell differentiation
110296921 (Cd4)
04659 Th17 cell differentiation
110296921 (Cd4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
110296921 (Cd4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110296921 (Cd4)
05170 Human immunodeficiency virus 1 infection
110296921 (Cd4)
09171 Infectious disease: bacterial
05135 Yersinia infection
110296921 (Cd4)
09163 Immune disease
05340 Primary immunodeficiency
110296921 (Cd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcal04090
]
110296921 (Cd4)
CD molecules [BR:
mcal04090
]
Proteins
110296921 (Cd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
ig
Tcell_CD4_C
V-set
Ig_3
I-set
Ig_2
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
110296921
NCBI-ProteinID:
XP_021021386
Ensembl:
MGP_CAROLIEiJ_G0028859
UniProt:
A0A6P5Q470
LinkDB
All DBs
Position
6:complement(120560762..120586045)
Genome browser
AA seq
496 aa
AA seq
DB search
MGGTCLQSLEPSYTHTCARSRVKEGLARGSDSHRLNETTMCRGISLRHLLLLQLQLSQLL
AVTQGKTLVLGKEGDSAELPCESSQKKITVFNWKFSDQRKILGQHGNGVLIRGGSPSQFD
RFDSKKGVWEKGSFPLVINKLKLEDSQTYICEVENRKEEVELWVFKVTFSPGTSLLQGQS
LTLTLDSNSKVSNPLTECKHKRGKVVSGSKVLSMSNLRVQDSDFWNCTVTLNQKKNWFGM
TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGRGELMWKAEKDSFFQSWISFSIKNK
EVSVQKSTKDLKLQLRETLPLTLKIPQVSLQFAGSGNLSLTLDKGTLHQEVNLVVMKVAQ
LNNTLTCEVMGPTSPQMRLTLKQENQEARVSEEQKVVQVMAPETGLWQCLLSEGEKVKMD
SRIQVLSRGANQTVFLAXVLGGSFGFLGFLVFCILCCVRCRHQQRQAARMSQIKRLLSEK
KTCQCPHRMQKTHNLI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtacctgtttgcaaagtctcgagccctcatatacacacacctgtgcaagaagc
agagtgaaggaaggactggccagaggctcagattcccatcggctcaacgagaccaccatg
tgccgaggcatctctcttaggcacttgctgctgctgcagctgcagctgtcacaactccta
gctgtcactcaagggaagaccctggtgctggggaaggaaggagattcagcagaactgccc
tgcgagagttcccagaagaagatcacagtcttcaactggaagttctctgaccagaggaag
attctggggcagcatggcaatggtgtattaattagaggaggttcgccttcgcagtttgat
cgttttgattccaaaaaaggggtatgggagaaaggatcgtttcctctcgtcatcaataaa
cttaagttggaagactctcagacctatatctgtgaagtagagaacaggaaagaggaggtg
gagttgtgggtgttcaaagtgaccttcagtccgggtaccagcctgttgcaagggcagagc
ctgaccctgaccttggatagcaactctaaggtctctaaccccttgacagagtgcaaacac
aaaagggggaaagttgtcagtggntccaaagttctctccatgtccaacctgagggttcag
gacagcgacttctggaactgcaccgtgaccctaaaccagaaaaagaactggttcggcatg
acactctcagtgctgggttttcagagcacagctatcacggcttataagagtgagggagag
tcagcggagttctccttcccactcaactttgcagaggaaaacgggcggggagagctgatg
tggaaggcagagaaggattctttcttccagtcctggatctccttttccataaagaacaaa
gaggtgtccgtacaaaagtccaccaaggacctcaagctccagctgcgggaaacgctccca
ctcaccctcaagataccccaggtctcacttcagtttgctggttcgggcaacctgtctctg
actctggacaaagggacactgcatcaggaagtgaacctggtggtgatgaaagtggctcag
ctcaacaacactttgacctgtgaggtgatgggacctacctctccccagatgagactgacc
ctgaagcaggagaaccaggaggccagggtctctgaggagcagaaagtggtccaagtgatg
gcccctgagacagggctgtggcaatgtctactgagtgaaggtgaaaaggtcaagatggac
tccaggatccaggttttatccagaggggcgaaccagacagtgttcctggctgncgtgctg
gggggctctttcggctttctgggtttccttgtgttctgcatcctctgctgtgtcaggtgc
cggcaccaacagcgtcaggcagcacgaatgtctcagatcaagaggctcctcagtgagaag
aagacctgccagtgcccccaccggatgcagaagacccataatctcatctga
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