Mus caroli (Ryukyu mouse): 110298007
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Entry
110298007 CDS
T05910
Symbol
Psen2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04330
Notch signaling pathway
mcal04722
Neurotrophin signaling pathway
mcal05010
Alzheimer disease
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110298007 (Psen2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
110298007 (Psen2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110298007 (Psen2)
05022 Pathways of neurodegeneration - multiple diseases
110298007 (Psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110298007 (Psen2)
Peptidases and inhibitors [BR:
mcal01002
]
Aspartic peptidases
Family A22: presenilin family
110298007 (Psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
110298007
NCBI-ProteinID:
XP_021022724
Ensembl:
MGP_CAROLIEiJ_G0014975
UniProt:
A0A6P5PVC0
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All DBs
Position
1:complement(170081014..170108864)
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AA seq
448 aa
AA seq
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MLTFMASDSEEEVCDERTSLMSAESPTSRSCQEGRPGPEDGESTAQWRTQESEEDCEEDP
DRYACSGAPGRPSGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLAVWNFGAVGMVCIHWKGPLVLQQAYLIVISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEAFEAPLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGNGDWNTTLACFIAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcacattcatggcctctgacagcgaggaagaggtgtgtgatgagcggacgtccttg
atgtcagccgagagtcccacatctcgctcctgccaggaaggcaggccaggcccggaggat
ggagagagcactgcccagtggaggacccaggagagcgaagaagactgtgaagaggacccg
gaccgctacgcatgcagtggggctcctgggcgaccgtcgggcctggaggaagagctgacc
ctcaagtatggggcgaagcacgtgatcatgctattcgtgcctgtcacgctgtgtatgatc
gtggtggtggccactatcaagtctgtgcgtttctacaccgagaagaacgggcagctcatc
tacacacccttcacggaggacacgccctcggtgggccagcggctcctcaactccgtgctg
aacaccctcatcatgatcagcgtcatcgtagtcatgaccatctttctcgtggtactctac
aagtatcgatgctacaagttcatccatggctggctgatcatgtcctccctgatgctcctc
ttcttgttcacctacatctacctcggggaagtgctcaagacctacaatgtggccatggac
tatcccacactcttcctggctgtctggaacttcggggcagtgggcatggtgtgcatccac
tggaaggggcctctggtgctgcagcaggcttaccttattgtgatcagcgcactcatggcc
ctggtgttcatcaagtacctgccggagtggtctgcctgggtcatcttgggtgccatctct
gtgtacgatctcgtggctgtgctgtgccccaaagggccactgagaatgctggtggaaact
gcccaggagagaaatgagcccatatttcctgccctgatatactcatctgccatggtgtgg
acggtgggcatggcaaagctggacccctcctctcaaggagcactgcagctcccctacgac
ccagagatggaagaagactcctacgacagttttggagaaccctcataccctgaagccttt
gaagcccccctgcctggctacccaggggaggagctggaggaggaggaggaaaggggcgtg
aagctcggcctgggagacttcatcttctacagcgtcctggtgggcaaggctgcagccact
ggcaacggagactggaacactacgctggcctgctttatcgccatcctcattggcttgtgt
ctcaccctcctgctgcttgctgtgttcaagaaggccctgcccgccctccccatctccatc
acctttggactcatcttctacttctccacagacaacctggtgcgccctttcatggacact
ctggcctcccaccagctctacatctga
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