Mus caroli (Ryukyu mouse): 110298727
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Entry
110298727 CDS
T05910
Symbol
Pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110298727 (Pkp1)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
110298727 (Pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_C
Med16_bridge
Motif
Other DBs
NCBI-GeneID:
110298727
NCBI-ProteinID:
XP_021023801
Ensembl:
MGP_CAROLIEiJ_G0014646
UniProt:
A0A6P5Q2I1
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Position
1:complement(127482133..127529933)
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AA seq
728 aa
AA seq
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MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVKRQKSKSSQSS
TLSHSNRGSMYDGLADNYNNYGTTSRSSYFSKFQAGNGSWGYPIYNGTLKREPDNRRFSS
YSQMENWSRHYPRGSCATPGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKT
TQNRCSFYSTCSGQKAVKKCPVRPPSCTSKQDPVYVPPISCNKDLSFGHSRASSKICSED
IECSGLTIPKAVQYLCSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP
NQNVQQAAAGALRNLVFRSTPNKLETRRQNGIREAVSLLRRSGSTEIQKQLTGLLWNLSS
TDELKEELVADALPVLTDRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAG
RQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYN
TRNAYTEKSSTGCFSNRGDKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMGKSK
KDATLEACAGALQNLTASKGLMSNGMSQLIGIKEKGLPQIARLLQSGNSDVVRSGASLLS
NMSRHPVLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMTSQPQMAKQYF
SNSMLNNVFNLCRNTASSPKAAEAARLLLSDMWASKELQSVLRQQGFDRNMMGNIAGANN
LRNFTSRF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactctccgctcaagactgcgctggcgtacgaatgcttccaggaccaggacaac
tccacgctcgctttgccctctgaccaaaagatgaagaccggcacgtcgggcaggcagcgc
gtgcaggagcaagtgatgatgaccgtcaaacggcagaagtccaagtcttcccagtcgtcc
accttgagtcactccaaccgaggttccatgtatgatgggctggctgacaattacaacaac
tacggcaccacgagtagaagcagctacttctccaagttccaggcagggaatggctcgtgg
ggatatccgatctacaatgggaccctcaagcgggagcctgacaacagacgcttcagctcc
tatagccagatggagaactggagccggcactatccccgaggcagctgtgccaccccgggc
gctggcagtgacatctgcttcatgcagaaaatcaaggcaagccgcagtgagcctgacctc
tactgtgacccaaggggcacactgcgcaagggcaccctgggcagcaagggccacaagacc
acccagaaccgatgcagcttctacagcacttgcagtggtcagaaggctgtcaagaagtgt
cccgtgcggccgccctcctgcacctccaagcaagacccggtgtatgtgccgcctatctcc
tgcaacaaggacctgtccttcggccactcaagggccagttccaagatctgcagtgaggat
attgagtgtagtgggctgaccatccccaaggctgtgcagtacctgtgctcccaggatgag
aagtaccaggccatcggagcctattacatccagcacacctgcttccaggatgaatctgcc
aagcaacaggtctatcagctggggggcatctgcaagctggtggacctcctccgcagcccc
aatcagaatgtccagcaggctgctgccggagccctgcgcaacctggtgttcaggagcacc
cccaacaagctggagaccaggaggcagaacggaatccgtgaggctgtcagcctcctgagg
agaagcgggagcacggagatccagaaacagctgactgggctactctggaacctgtcttcc
actgacgagctgaaggaggagctggtggccgatgccctgcctgttctgactgaccgggtc
atcattcctttctctggctggtgtgatggtaacagcaacatgtcccgggaagtagtggac
cctgaggtcttcttcaatgccacaggctgcttgaggaacctgagttcagctgatgctggc
cgccaaactatgcggaactactctgggctcattgactccctcatggcctatgtccagaac
tgcgtggctgccagccgctgcgatgacaagtctgtggagaactgcatgtgtatcctgcat
aacctctcctaccgcctggacgccgaggtgcccactcgctaccgccagctagagtacaat
acccgcaatgcctacaccgagaagtcctccactggctgcttcagcaacaggggtgacaag
atgatgaacaataactatgactgcccacttccggaggaggagaccaaccccaagggcagc
agctggctgtaccactcagatgccatccgcacctacctgaacctcatgggaaagagcaag
aaagatgctaccttggaggcctgtgctggggccctgcagaacctgacagccagcaagggg
ctgatgtccaatggtatgagtcagttgattggaataaaggaaaagggcctgccacaaatc
gcccgtctcctgcaatctggcaattcagatgtggtgcggtccggagcctctctgctgagc
aacatgtctcgccaccctgttctgcacagagtgatgggaaaccaggtgttcccagaggta
accagactcctcacgagccacaccggcaataccagcaactctgaagatatcttgtcctca
gcctgctacactgtgaggaacctgatgacctcacagcctcagatggccaagcagtacttc
tccaacagcatgctcaacaatgtcttcaacttgtgccgcaacactgcctcctcacctaag
gctgcagaggctgcccggctactcctgtctgacatgtgggccagcaaggagctgcagagt
gtcctcaggcagcaaggtttcgataggaacatgatgggaaacatagctggggccaacaac
ctcagaaacttcacctcccggttctaa
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