Mus caroli (Ryukyu mouse): 110301686
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Entry
110301686 CDS
T05910
Symbol
Trpc6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04022
cGMP-PKG signaling pathway
mcal04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
110301686 (Trpc6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110301686 (Trpc6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110301686 (Trpc6)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110301686 (Trpc6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
110301686
NCBI-ProteinID:
XP_021027930
Ensembl:
MGP_CAROLIEiJ_G0031767
UniProt:
A0A6P5QCP9
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Position
9:4713898..4830366
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AA seq
930 aa
AA seq
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MSQSPRFVTRRGGSPKAASGAGTRRNESQDYLLMDELGDDGYPQLPLPPYGYYPSFRGNE
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
HSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
NHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCTECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDEETRQPGDLGRP
NLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLA
LIYWCAPCSKMGKILRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAR
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPTDPQIISEGLYAI
AVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIG
AKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLN
MLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFK
KWMSELIQGQKQGFQEDAEMNKRNEEKKFGISGSHEDLSKFSLDKNQLAHHKQSSTRSSE
DYRLNSFSNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEE
KSQNTEDLAELIRKLGERLSLEPKLEESHR
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagcccgaggttcgtgacccggaggggcggctctccgaaggctgcctctgga
gcgggcacgcggcgcaacgagagccaggactatctgctgatggacgagctgggagacgac
ggctacccacagctcccgctgccaccatatggctactaccctagcttccggggtaatgaa
aacagactgactcaccggcggcagacggttcttcgtgagaagggaagaaggttagctaat
cgaggaccagcatacatgtttaatgatcactcaacaagcctgtctattgaggaggaacgc
tttctagatgcagctgaatatggcaacatcccagtggtgcggaagatgctagaagagtgt
cattccctcaatgttaactgtgtggattacatgggccagaatgccctacagctggctgtg
gccaatgagcacttggaaatcacagagctgctactcaagaaggaaaacttgtctcgagtt
ggggatgctttacttttagccattagtaaaggttatgtacgaattgtggaggcaatcctc
aaccatccagcttttgctgaaggcaaaaggttagcgacaagccccagccagtctgaactt
cagcaagatgacttttatgcctatgatgaagatgggacccggttctcccatgatgtgaca
ccaatcattcttgctgcacattgccaggaatatgaaattgtgcataccctcctgagaaag
ggtgcccggattgagcgacctcatgattacttctgcaagtgtacagaatgcagccagaag
cagaagcatgattccttcagccactctagatccaggatcaatgcatacaaaggtctggca
agtccagcatacctgtcattgtccagtgaagatccagtcatgactgctttagaacttagc
aatgagctggcagtgcttgccaacattgagaaagagttcaagaatgactacaggaagctg
tctatgcagtgcaaggatttcgttgttggtctcctggacctctgcagaaacacagaggaa
gtggaggccatcctgaacggggatgaagagactcgccagcccggggacctcggccgtcca
aatctcagccgtttaaaacttgctattaagtatgaagtaaaaaaatttgtggctcatcca
aactgtcagcagcagctcctgtccatatggtatgagaacctctctggtttacggcagcag
accatggcagtgaagttccttgtggtccttgccgttgccattggattgcccttcctggct
ctcatatactggtgtgctccttgcagcaagatggggaagatattgcgaggaccgttcatg
aagtttgtagcacacgcagcctccttcaccattttcctggggctgctcgtcatgaatgca
gctgacagatttgaaggcaccaagctcctccctaatgaaaccagcacagataatgcaagg
cagctgttcaggatgaaaacatcctgtttctcatggatggagatgctcattatatcctgg
gtaataggcatgatatgggctgaatgtaaagaaatctggactcaaggcccaaaagaatac
ttatttgagttgtggaatatgcttgactttggaatgctggcaatctttgcagcatcattc
attgcaagatttatggcgttctggcatgcatccaaagctcagagcatcattgatgcaaat
gacactttaaaggatttgacaaaagtcacactgggggacaacgttaaatactacaatctg
gccaggataaagtgggaccctactgatcctcagatcatctctgaaggtctttacgcaatc
gctgtggttttaagtttctccagaatagcttacattttaccagcaaatgaaagctttgga
cctctgcagatttcacttggaagaacagtgaaagatatcttcaaattcatggtcatattc
atcatggtgtttgtagcctttatgattggaatgttcaacctttactcctactacattggt
gcaaaacagaatgaagcattcacaacagttgaggaaagttttaagacactgttctgggcc
atatttggtctttctgaagtgaagtcagtggtcattaactacaatcacaagttcattgaa
aacatcggctacgttctgtatggtgtctataatgtcacgatggtcattgttttgctaaat
atgttaattgcgatgatcaatagctcattccaggaaattgaggatgatgcggatgttgag
tggaagtttgcaagggccaaattgtggttttcctactttgaggagggaagaacacttcct
gtccccttcaatcttgtgccaagtccaaaatccttgctttatctcctattgaaatttaag
aaatggatgtctgagctcatccagggtcaaaagcaaggcttccaagaagatgcagagatg
aacaagagaaatgaagaaaagaaatttggaatttcaggaagtcacgaagacctttcaaaa
ttttcacttgacaaaaatcagttggcacaccacaaacaatcaagtacaaggagctcagaa
gattatcgtttaaatagcttcagtaatcctccaagacaatatcagaaaatcatgaagaga
ctcattaaaagatatgtattgcaggcccagattgataaggagagcgatgaggtgaatgaa
ggggaattgaaggaaattaagcaagacatctcaagtctccgttatgaactccttgaagaa
aaatcgcagaacacagaagacctagcagagctcattaggaaactcggggagagactgtct
ttagagccaaagctggaggaaagccacagatag
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