Mus caroli (Ryukyu mouse): 110303160
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Entry
110303160 CDS
T05910
Symbol
Tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04060
Cytokine-cytokine receptor interaction
mcal04064
NF-kappa B signaling pathway
mcal04380
Osteoclast differentiation
mcal04917
Prolactin signaling pathway
mcal05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110303160 (Tnfrsf11a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110303160 (Tnfrsf11a)
09150 Organismal Systems
09152 Endocrine system
04917 Prolactin signaling pathway
110303160 (Tnfrsf11a)
09158 Development and regeneration
04380 Osteoclast differentiation
110303160 (Tnfrsf11a)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
110303160 (Tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
mcal04050
]
110303160 (Tnfrsf11a)
04090 CD molecules [BR:
mcal04090
]
110303160 (Tnfrsf11a)
Cytokine receptors [BR:
mcal04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110303160 (Tnfrsf11a)
CD molecules [BR:
mcal04090
]
Proteins
110303160 (Tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
Chordopox_A13L
Motif
Other DBs
NCBI-GeneID:
110303160
NCBI-ProteinID:
XP_021029793
Ensembl:
MGP_CAROLIEiJ_G0014485
UniProt:
A0A6P5QIP9
LinkDB
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Position
1:98487019..98544366
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AA seq
621 aa
AA seq
DB search
MAPRARRRRQLPAPLLALCVLLVPLQVTLQVTPPCTQERHYEHLGRCCSRCEPGKYLSSK
CTPTSDSVCLPCGPDEYLDTWNEEDKCLLHKVCDAGKALVAVDPGNHTAPRRCACTAGYH
WNSDCECCRRNTECAPGFGAQHPLQLNKDTVCTPCLLGFFSDVFSSTDKCKPWTNCTLLG
KLEAHQGTTESDVVCSSSMTLRRPPKEAQAYLPSLIVLLLFISVVIVAAIIFGVYYRKGG
KALTANLWNWVNDACSSLSGNKESPGDRCVGSHSATSSQQEVCEGILLMTREEKMVPEDG
AGVCGPVCAAGGPWAEVSDSRTFTLVSEVETQGDLSRKIPTEDEYTDRSSQPSNGSLFLI
QQGSKSIPPFQEPLEVGENDSLSQCFTGTESTVDSEGCDFTEPPSRTDSMPVSPEKHLTK
EIEGDSCLPWVISSNSADGYTGSGNTPGEDHEPFPGSLKCGPLPQCAYSMGFPSETAEAG
VRPQDRADERGASGSGSSPSDQPPASGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQ
EGPGPAEPESEPVGRPVQEETLAHKDSFAGTTPRFPDVCATGAGLQEQGAPRQKDGASRP
VQEQGGAQTSLHTQGSGQCAE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcgcgcccggcggcgccgccagctgcccgcgccgctgctggcgctctgcgtg
ctgctcgttccactgcaggtgaccctccaggtcactcctccatgcacccaggagaggcat
tatgagcatctcggacggtgttgcagcagatgcgaaccaggaaagtacctgtcctctaag
tgcactccgacctctgacagtgtgtgtctgccctgtggcccagatgagtacttggacacc
tggaatgaagaagataaatgcttgctgcataaagtctgtgatgcaggcaaggccctggtg
gcggtggatcctggcaaccacacggccccacgtcgctgtgcctgcacagcgggctaccac
tggaactcagactgcgagtgctgccgcaggaacacggagtgtgcacccggcttcggagct
cagcatcccttgcagctcaacaaggatacggtgtgcacaccctgcctcctgggcttcttc
tcagatgtcttttcgtccacagacaaatgcaaaccttggaccaactgcaccctccttgga
aagctagaagcacaccaagggacaacggaatcagatgtggtctgcagctcttccatgaca
ctgaggagaccacccaaggaggcccaggcttacctgcccagtctcatagttctgctcctc
ttcatttccgtggtaatagtggctgccatcatcttcggtgtttactacaggaagggagga
aaagcgctgacagctaatttgtggaattgggtcaatgatgcttgcagtagtctaagtgga
aataaggagtccccaggggaccgttgtgttggttcccactcggcaacctccagtcagcaa
gaagtgtgtgaaggtatcttactaatgactcgggaggagaagatggttccagaagacggt
gctggagtctgtgggcctgtgtgtgccgcaggtgggccctgggcagaagtcagtgattct
aggacgttcacactggtcagcgaggttgagacgcaaggagacctctcaaggaagattccc
acagaggatgagtacacagaccggtcctcacagccttcgaatggttcactgttcctaatc
cagcagggaagcaaatctatacccccattccaggagcccctggaagtgggagagaatgac
agtttaagccagtgtttcaccgggactgaaagcacggtggattctgagggctgtgacttc
actgagcctccgagcagaactgactctatgcctgtgtcccctgaaaagcacctgacaaaa
gaaatagaaggtgacagttgcctcccctgggtgatcagctccaactcagcagatggctac
acaggcagtgggaacactcctggggaggaccatgaaccctttccagggtccctgaaatgt
ggaccattgcctcagtgtgcctacagcatgggctttcccagtgaaacagcagaggcggga
gtacggccccaggacagggctgatgagaggggagcctcagggtccgggagctcccccagt
gaccagccacctgcctctgggaacgtgactggaaacagtaactccacgttcatctctagc
gggcaggtgatgaacttcaagggtgacatcatcgtggtgtatgtcagccaaacctcgcag
gagggcccgggtcccgcagagcccgagtcggagcccgtgggccgcccggtgcaggaggag
acgctggcacacaaagactcctttgcgggcaccacgccgcgcttccccgacgtctgtgcc
accggggctgggctgcaggagcagggggcaccccggcagaaggacggggcatcgcggcca
gtgcaggagcagggcggggcgcagacctcactccatacccaggggtccggacaatgtgca
gaatga
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