Mus caroli (Ryukyu mouse): 110304268 Help Entry 110304268         CDS       T05910                                  Symbol Sqstm1 Name (RefSeq) sequestosome-1 isoform X1   KO K14381   sequestosome 1 Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04137   Mitophagy - animal mcal04140   Autophagy - animal mcal04217   Necroptosis mcal04218   Cellular senescence mcal04380   Osteoclast differentiation mcal05014   Amyotrophic lateral sclerosis mcal05022   Pathways of neurodegeneration - multiple diseases mcal05418   Fluid shear stress and atherosclerosis Brite KEGG Orthology (KO) [BR:mcal00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     110304268 (Sqstm1)    04137 Mitophagy - animal     110304268 (Sqstm1)   09143 Cell growth and death    04217 Necroptosis     110304268 (Sqstm1)    04218 Cellular senescence     110304268 (Sqstm1)  09150 Organismal Systems   09158 Development and regeneration    04380 Osteoclast differentiation     110304268 (Sqstm1)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     110304268 (Sqstm1)    05022 Pathways of neurodegeneration - multiple diseases     110304268 (Sqstm1)   09166 Cardiovascular disease    05418 Fluid shear stress and atherosclerosis     110304268 (Sqstm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mcal04131]     110304268 (Sqstm1)    03029 Mitochondrial biogenesis [BR:mcal03029]     110304268 (Sqstm1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcal04147]     110304268 (Sqstm1) Membrane trafficking [BR:mcal04131]  Autophagy   Mitophagy    Cargo receptors     110304268 (Sqstm1)   Pexophagy     110304268 (Sqstm1)   Aggrephagy     110304268 (Sqstm1)   Xenophagy     110304268 (Sqstm1)   ER-phagy    ER-phagy recepters     110304268 (Sqstm1)   Other autophagy associated proteins    Midbophagy     110304268 (Sqstm1) Mitochondrial biogenesis [BR:mcal03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     110304268 (Sqstm1) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    110304268 (Sqstm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UBA_5 PB1 ZZ Motif Other DBs NCBI-GeneID:  110304268 NCBI-ProteinID:  XP_021031179 Ensembl:  MGP_CAROLIEiJ_G0016284 UniProt:  A0A6P5QKI4 LinkDB All DBs Position 11:complement(45092356..45102531) Genome browser AA seq 442 aa AA seqDB search MASFTVKAYLLGKEEATREIRRFSFCFSPEPEAEAQAAAGPGPCERLLSRVAVLFPTLRP GGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRREHRPPCAQEAPRN MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNPFGHLSDSFS HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDGRPCPTTESASAPPEDPNVNFLKNV GESVAAALSPLGIEVDIDVEHGGKRSRLTPTTPESSSTGTEEKSNTQPSSCSSEVSKPDG AGEGPAQSLTEQMKKIALESVGQPEEQMESGNCSGGDDDWTHLSSKEVDPSTGELQSLQM PESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQ TKNYDIGAALDTIQYSKHPPPL NT seq 1329 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgttcacggtgaaggcctatcttctgggcaaggaggaggcgacccgcgagatc cgccgcttcagcttctgcttcagcccggagccggaggcggaagcccaggccgcggccggc ccggggccctgcgagaggctgctgagccgagtggctgtgctgttccccacgctgaggcct ggcggcttccaggcgcattaccgcgatgaggatggggacttggttgccttttccagtgat gaggagctgacaatggctatgtcctatgtgaaagatgacatcttccgcatctacattaaa gagaagaaggagtgccggcgggaacatcgcccaccatgtgctcaggaggcaccccgaaac atggtgcaccccaatgtgatttgtgatggttgcaacgggcctgtggtgggaactcgctat aagtgcagtgtgtgcccagactacgacctgtgcagcgtgtgcgaggggaagggcctgcac agggaacacagcaagctcatctttcccaacccctttggccacctctctgatagcttctct catagccgctggcttcggaagctgaaacatggacactttggctggcctggctgggagatg ggcccaccagggaactggagcccacgtcctcctcgcgcaggggatggccgtccttgcccc acaactgagtcagcttctgctccaccagaagatcccaatgtcaatttcctgaagaatgtg ggggagagtgtggcagctgccctcagccctctaggcattgaggttgacattgatgtggaa catggagggaagagaagccgcctgacacccaccaccccagaaagttccagcacaggcaca gaagaaaagagtaacactcagccaagcagctgctcttcggaagtcagcaaacctgacggg gctggggagggccctgctcagtctttgacagagcaaatgaaaaagatagccttggagtcg gtgggacagccagaggaacagatggagtcgggaaactgctcaggaggagacgatgactgg acacatttgtcttcgaaagaagtggacccatccacaggtgaactccagtctctacagatg ccagaatcggaagggccaagctctctagacccctcacaggaaggacccacagggctgaag gaagctgccctgtacccacatctcccaccagaggctgatccccggctgattgagtccctc tcccagatgctgtccatgggtttctcggatgaaggcggctggctcaccaggctcctacag accaagaattatgacatcggggctgctctggacacgatccagtattcgaagcaccctcca ccattgtga

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