Mus caroli (Ryukyu mouse): 110305069
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Entry
110305069 CDS
T05910
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110305069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110305069
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110305069
Membrane trafficking [BR:
mcal04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110305069
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110305069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
nSTAND3
NB-ARC
AAA_22
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-GeneID:
110305069
NCBI-ProteinID:
XP_021032502
UniProt:
A0A6P5QUE2
LinkDB
All DBs
Position
11:complement(65862272..65905321)
Genome browser
AA seq
1182 aa
AA seq
DB search
MEESQSKQESSTKVAQHECQEDVDPTFKTKKLMEVELMKHRVQLERNLKLRTFPEARTKQ
VEEALYPLLTCSSKSKNLFQNFTKLLLFKKLCQRGSENLVRESWYPCVPEEGGHMTDIQD
LFGPNLGTQEKPQLVIIEGAAGIGKSTLARLVKRAWMEGQLYRDHFHHVFFFTCRELAQC
KQLSLAELIAQGQEVPTAPIRQILSHPEKLLFILDGIDEPAWVLEEQNPELCLHWSQTQP
VYTLLGSLLGKSILPEASFLLTTRTTALQKFIPSLEHPCQVEVLGFTLFERKNYFYKYFG
KKKGGITAFTLVKSNSALLTLCEVPWVCWLVCTCLKKQMEQGRGLSLTSQTTTALCLEYL
SLTIPGQHMRTQLRALCSLAAEGVCQRRTLFSESDLCKQGLDEDAIATFLKTGVLQKQAS
SLSYSFAHLCLQEFFAAMSYILDDSEERHADMKNDRIVETLVELYGRQNLFEAPTVRFLF
GLLSKEGLKEMEKLFSCSLPGKTKLKLLWHILGKSQPHQPPCLGLLHCLYENQDMELLTH
VMHDLQGTIVPEPDDLAHTVLQTNVKHLVIQTDMDLMVVTFCIKFCCHVRSLQLNRKVQQ
GHKLAAPGMVLYRWTPITDASWKIFFSNLKLTRNLEELDLSGNPLSYYAVHSLCKALRKR
GCQLKTLWLVECGLTSTYCSLLASVLSARSSLTELDLQMNNLGDGGVKMLCEGLRNPACN
LSILWLDQASLSDQVIALLRTLEAKNPKLHISSTWKPHVMVPTMNMDKEEVGDSQALLKQ
QRQQSGDKHMEPLGTEDKFWGPRVPVTTEVVDRERNLYRVQLPMAGFYHCPSTGLHFVVT
RAVTIEIEFCAWSQYLDKTPLQQSHMVVGPLFDIKAEQGAVTAVYLPHFVALQEGIMDSS
LFHVAHFQEHGMVLETPARVEQHYAVLENPSFSPVGILLRMIPAVGHFIPITSITLIYYH
LYLKDVTFHLYLVPNDCTIRKAIDDEEMKFQFVRINKPPPVDALYLGSHYIVSSSKLVEI
IPKELELCYRSPGESQLFSEIDIGHMDSEIKLQIKDKRHMNLKWEALLKPGELRPALPKI
APAPKDAPSLLYFMDQHREQLVARVTSVDPLLDKLHGLVLSEDSYEVVWAESTNQDKMRK
LFSLSRSWSWDCKDQFYQALKETHPHLVMDILEKLGGVSVRS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctcagtccaagcaggaaagtagcacaaaggtggctcagcatgaatgtcaa
gaggatgtggacccaaccttcaaaacaaagaaacttatggaggtggagctaatgaagcac
agagtacagctagagaggaacttgaagctaagaacctttccagaagcacgtacgaagcaa
gtagaagaggctctttaccctcttttaacatgttcatcaaaaagcaagaatctcttccaa
aatttcacaaaactactactctttaaaaaattgtgccaaagaggctcagaaaacttggtc
agggaaagctggtatccatgtgtaccagaagaaggaggacatatgactgacatccaagac
ttatttggcccaaacttaggtactcaggaaaagcctcaattagtcataatagaaggagct
gctgggattgggaagtcaacactggccagactggtgaagagagcctggatggaaggccag
ctctacagggatcacttccatcatgtcttcttcttcacctgcagagagctggcccagtgc
aagcaactgagtctggctgagctcatagcacaaggccaggaagtgcccacagctcccatt
aggcagatcttgtctcaccctgagaagttgctcttcattctggatggcatagatgagcca
gcatgggtcttggaggagcagaatcctgagttatgtcttcactggagtcaaacccagcct
gtgtacactctgctgggcagtttacttgggaaatccatccttcctgaggcttccttcttg
ctcacaacccgtaccacagctctacagaaattcattccttccctggagcatccatgtcaa
gtggaagtcctaggattcactttgtttgaacggaaaaactatttctacaaatattttggg
aagaaaaaaggtggaattactgcttttacattagttaaatcaaactcagcgctcctgact
ctgtgtgaagttccctgggtgtgctggttggtctgcacttgcctgaaaaagcagatggag
cagggtagagggctctcactgacctcacagaccaccacagccctctgcctggaatacctt
tccttgacaatcccagggcagcacatgaggacccagctcagagccctctgctcattggct
gctgagggggtctgccaaagaaggaccctgttcagtgaaagcgacctctgtaagcaaggg
ttagacgaggatgccattgccactttcctgaagactggtgtccttcaaaagcaggccagc
tctctgagctacagctttgcccacttgtgtcttcaggagttctttgcagcaatgtcctac
atcttggatgatagtgaggaaagacatgctgatatgaaaaatgacagaattgtggaaaca
ctggtagaattgtatggaagacaaaacctgtttgaggcacccactgtgcgctttctgttt
ggtcttttgagtaaagagggattgaaagaaatggaaaagctcttttcctgcagccttcct
ggaaagacaaagttgaaactactatggcacatcctagggaaatcccaaccccatcaacca
ccttgtctgggtttgctccactgtctgtatgaaaatcaggatatggagctcctgacacat
gtgatgcatgatctgcaaggaacaatagtgcctgaaccagatgatttggcacacacagtg
ttgcagacaaacgtgaagcacctggtgatacagacagacatggacctcatggtggttact
ttctgcattaagttctgctgtcatgtgaggagtcttcagctgaacaggaaggtacagcag
ggacataagttggcggcccctgggatggttctgtacagatggaccccaatcactgatgcc
agttggaagattttcttctccaatcttaagttaaccagaaacctggaagaattggaccta
agtggaaatccactgagctactatgcagtacacagtctttgtaaggccctgagaaagcgt
ggctgccaactaaagaccttgtggcttgttgaatgcggcctcacatccacatactgctca
cttctggcttcagtactcagtgcccgctccagcctgactgagctagatctgcagatgaat
aacctgggtgatggtggtgtgaagatgttgtgtgaggggctcaggaaccctgcctgcaac
ctcagcatcctgtggctggaccaggcatctctcagtgaccaagtgattgcactgctcagg
actctggaggcaaagaatccaaagctgcacatctccagcacatggaagccacatgtgatg
gtccctacaatgaacatggataaagaagaagtgggtgatagccaggccctactgaagcag
cagagacaacagtcaggagacaaacacatggaacctctggggactgaagataagttctgg
ggccctagagtacctgtgactactgaggtggttgacagagagaggaacctgtaccgagtt
cagttacccatggctggtttctaccactgtcccagtacaggacttcactttgtggtgaca
agggcagtgacaatcgagattgaattctgtgcctggagccaatatctcgacaagactccc
ttgcagcagagtcacatggtagttggacctctgtttgacatcaaggctgagcaaggagct
gtgactgcagtgtacctccctcattttgtggccctccaagagggaatcatggacagttcc
ttgttccatgttgcccactttcaagaacatgggatggtcctagaaacaccagcaagggtg
gaacagcattatgcagtactggaaaacccaagcttctccccagtggggattctactgaga
atgattccggctgtcggacacttcatccccatcacttccatcacactgatctactatcac
ctgtatctcaaggacgtcacctttcacctttacctggtccccaatgactgcactattcgg
aaggccattgatgatgaagaaatgaagtttcagtttgtgcgcataaacaagccaccccca
gtagatgctctttatcttggttcccactatatcgtgtcttcctccaaattggtggaaatt
atcccaaaggaactagagctgtgctaccgaagccctggggaatcccagctcttctctgag
atcgacattgggcacatggattcagagattaagctgcaaatcaaagacaagaggcacatg
aatctcaaatgggaggccttgctgaaaccaggagaactcagacctgcactgcccaagatt
gctccagcccccaaagatgctccttccttgctgtacttcatggaccagcatcgggagcag
ctggtggcccgagtgacatctgtggaccctctcttggacaagctgcatggtctggtgctg
agtgaagattcctatgaagtagtgtgggctgagagcacaaaccaagacaagatgaggaag
ctcttcagcctcagccggtcctggagctgggattgcaaagaccaattctaccaagctctg
aaggagacccatcctcacctggtcatggatatacttgagaagttgggtggggtctctgtg
agatcctga
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integrated database retrieval system
