Mus caroli (Ryukyu mouse): 110305614
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Entry
110305614 CDS
T05910
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X2
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110305614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110305614
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110305614
Membrane trafficking [BR:
mcal04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110305614
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110305614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
LRR_6
AAA_16
NB-ARC
NPHP3_N
nSTAND3
AAA_30
AAA_22
Zeta_toxin
AAA_14
AAA_18
Motif
Other DBs
NCBI-GeneID:
110305614
NCBI-ProteinID:
XP_021033301
UniProt:
A0A6P5QW30
LinkDB
All DBs
Position
11:complement(65917865..66061824)
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AA seq
1175 aa
AA seq
DB search
MEKSQPKKKSRTNVAQHEGQLNLDPTFKTQKRTGVELMKHRHKPEGHLKLGAIPKVHIKQ
EGETLEPTLSRKRKNLVQKLTNLLLFEKLCSRGSENLIRKSWYSCEEEERGHMIEIQDLF
GPNRGTHKRPQLVIIEGAAGIGKSTLARQVKRAWKEGQLYRDHFQHVFFLSCRELAQNEQ
LSLTELIAQGQEVPTVPIRQILSHPEELLFILDGIDEPAWVLADQNPELCLHWSQRQPVH
TLLGSLLGKSILPGASFLLSARTTALQKIIPYVGQPRRVEVLGFSEFERKNYFHKYFVNE
SNAIAAFRLVLSNPVLLTLCEVPWVCWLVCTCLKKQMEQGGELSLTSQTTTALCLKYLSL
TIPGQHMGTQLRALCSLAAEGICQRRTLFSESNLCKQGLAEDAIATFLKIGILQKQSSSL
SYSFAHLCLQEFFAAMSYILEDSEERCGGMEFKRTVETLIEVYGRHTLCEEPTVHFLFGL
VNAQGMREMKKIFDFKLPLGIELKMLRSTLGNPPYQHHLGLLHCLYESQEEVLLTYVLCN
LHLTGPDKNYMEATVSQTNVKHLVIQTDMELMVVTFCIQFYCHVKSLRVNMKGQQGHKLT
VASMVLYRWTPITDASWKILFYNLKFARNLEELDLSGNPLSYSAVQYLCKALRYPGWQLK
NLWLVDCHLTSTYCSLLASLLSDHPSLTELDLQLNDLGDDGVRLLCLRIPADALSILWLD
QATLSAQVITELRTVEAENPKLHISSTWKPHVMIPTENKDKEEVSDSPKSFKQQRKQSGD
KHMESLWTDNDFWGPTGPVATEVVDRERNQYRVQLPMAGCYHCPSTGLHFVVTRAVTIEI
EFCAWSQYLDETFLKHSHMVAGPLFDIKAEQGAVTAVYLPHFVALQEGIVDSSLFHVAHF
QEHGMVLETPARVEQHYAVLENPSFSPMGVLLRMIPAVGHFIPITSITLIYYHLYLRDVT
FHLYLVPNDCTIRKAIDEEEMKFQFVRINKPPPVDTLYIGSRYIVSATKKVKIIPKELEL
CYRSPGESQLFSEIYVRDMGSGIQLQLRDKGHKKLKWEAFLKPGDLRPALPRISQALKDA
PSSLHFMDQHREQLVARVTSVDPLLDKLHGLVLSEESYEAVRAENTNQDKMRKLFNLSRS
WSPACKDQFYQALKETHPHLVMDLFEKSGGVSLGS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctcagcccaagaagaaaagtcgcacaaatgtggctcagcatgagggtcaa
ctaaatttggaccccaccttcaaaacacagaaacgtacaggtgtggagctgatgaagcac
agacacaagccagagggacacttgaagctaggggcaattccaaaagtacacataaaacaa
gaaggcgagactctggagcccacattgtcaaggaaaagaaagaatctggtccaaaagtta
acaaacctactactctttgaaaaattgtgctcaagaggctcagaaaacttgatcaggaaa
agctggtattcatgtgaagaagaagaaagaggacatatgattgagatccaagacttattt
ggcccaaacagaggtacccataaaaggcctcaattagtcataatagaaggtgctgctgga
attgggaagtcaacactggccaggcaggtgaagagagcctggaaggaaggccagctctac
agggatcacttccagcatgtcttcttcctcagttgcagggagctggcccagaatgagcag
ctgagtctgactgagctcatagcacaaggccaggaagtgcccaccgttcccatcaggcag
atcctgtctcaccctgaggagctgctcttcatcctggatggcatagatgagccagcatgg
gtcttggcagaccagaatcctgagctatgtctgcactggagtcaaagacagcctgtgcac
acactgttgggcagtttactagggaaatccatccttcctggggcttccttcttgctctca
gctcggaccacagctctacagaagatcattccttatgtagggcagccacgtcgggtggaa
gtcctggggttctctgagtttgaacggaagaactatttccacaaatattttgtgaacgag
agcaatgcaattgctgcttttagattggtgttatctaacccagtgctcctgaccctgtgt
gaggttccctgggtgtgctggttggtctgcacttgcctgaaaaagcagatggagcagggt
ggagagctgtccctgacctcacagacgaccacagccctctgcctgaaatacctttccctg
acaatcccagggcagcacatggggacccagctcagagccctctgctcactggctgctgag
ggaatctgccaaagaagaaccctgttcagtgaaagcaacctctgtaagcaagggttagca
gaggatgccattgccactttcctgaagatcggtatccttcaaaagcagtccagctctctg
agctacagctttgcccacttgtgtctccaggagttctttgcagcaatgtcttacatcttg
gaggatagtgaagaaagatgtggtggtatggaattcaaaagaactgtggaaacactgata
gaagtatatggaagacataccctgtgtgaggaacccactgtgcactttctatttggtctt
gtgaatgcacagggaatgagagaaatgaaaaagatctttgacttcaaactgcctttgggg
atagagttgaagatgctaaggagcaccctagggaacccaccctatcaacatcatctgggt
ttactccactgtctgtatgagagtcaggaagaggtgctcctgacatatgtgttatgtaat
cttcacttaacagggcctgacaaaaattacatggaagccacagtgtcgcagacaaacgtg
aagcacctggtgatacagacagacatggagctcatggtggtcactttctgcattcagttc
tactgtcacgtgaagagtcttcgggtgaacatgaaaggacagcagggacataagctgaca
gttgccagtatggttctgtacagatggaccccaatcactgatgccagttggaagattctc
ttctacaatcttaaattcgccagaaatctggaggagctggacctcagtgggaatccactg
agctactctgcagtgcaatatctctgtaaggccctgagataccctggctggcaactaaag
aacttgtggcttgttgactgtcacctcacatccacatactgctcactcctggcctcattg
ctgagtgaccatcccagcctgactgagctagacctgcagctgaatgacctgggtgacgat
ggtgtgaggctgttgtgtcttaggattcctgctgatgctctttctatcctgtggctggat
caggccactctcagtgcccaggtgattacagagctcaggaccgtggaggcagagaatcca
aagctgcacatctccagcacatggaagccacatgtgatgatccctactgagaacaaggat
aaagaagaagtgagtgatagcccaaagtcattcaagcagcagcgaaaacaatcaggagac
aaacacatggaatctctttggactgacaatgacttctggggtcctacaggacctgtggct
actgaggtggttgatagagagaggaaccagtaccgagttcaattgcccatggctggttgc
taccactgtcccagcacaggactccactttgtggtgacaagggcagtgacaatagagatt
gaattctgtgcctggagccaatacctggatgagacttttttaaagcacagtcacatggtg
gctggaccactgtttgacatcaaggctgagcaaggagctgtgactgctgtgtacctccct
cattttgtggctctacaagagggaatcgtggacagctccttgttccatgttgcccacttt
caagaacatgggatggtcctagaaacaccagcaagggtggaacagcattacgcagtactg
gaaaacccaagcttctccccaatgggggttctactgagaatgattccagctgttggacac
ttcatccccatcacttccatcacactgatctactatcacctctatctcagggatgtcacc
tttcacctttacttggtccccaatgactgcactattcggaaggccattgatgaggaagaa
atgaagtttcagtttgtgagaataaacaagccacccccagtagacactctttatattggt
tcccgctatatcgtgtctgccaccaagaaggtgaaaattatcccaaaggaactggagctg
tgctaccgaagccctggggaatcccagctcttctctgagatctacgttagagacatgggt
tcggggattcagctacaactcagagacaaggggcacaagaaactcaaatgggaggccttc
ctgaaaccaggagacctaagacctgctctgcccaggatttcccaagccctcaaagatgct
ccttcctcactacacttcatggaccagcatcgggagcagctggtagcccgagtgacatca
gtagaccctctcttggacaagctgcatggtctggtgctgagtgaagagtcctatgaggca
gtgcgggctgagaacacaaaccaagataagatgaggaagctcttcaacctcagccggtcc
tggagtccagcctgcaaagaccaattctaccaagctctgaaggagacccatcctcacctg
gtcatggacctctttgaaaagtcaggtggggtctctttgggatcctga
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