Mus caroli (Ryukyu mouse): 110307919
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Entry
110307919 CDS
T05910
Symbol
Slc12a5
Name
(RefSeq) solute carrier family 12 member 5 isoform X1
KO
K23967
solute carrier family 12 (potassium/chloride transporter), member 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110307919 (Slc12a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110307919 (Slc12a5)
Transporters [BR:
mcal02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
110307919 (Slc12a5)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Motif
Other DBs
NCBI-GeneID:
110307919
NCBI-ProteinID:
XP_021035860
Ensembl:
MGP_CAROLIEiJ_G0024678
UniProt:
A0A6P5QPE2
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Position
2:156909663..156948142
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AA seq
1139 aa
AA seq
DB search
MSRRFTVTSLPPAASAASADPESRRHSVADPRRLPREDVKGDGNPKESSPFINSTDTEKG
REYDGRNMALFEEEMDTSPMVSSLLSGLANYTNLPQGSREHEEAENNEGGKKKPVQAPRM
GTFMGVYLPCLQNIFGVILFLRLTWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNG
VVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEILLAYLFPAMAIFKAE
DASGEAAAMLNNMRVYGTCVLTCMATVVFVGVKYVNKFALVFLGCVILSILAIYAGVIKS
AFDPPNFPICLLGNRTLSRHGFDVCAKLAWEGNETVTTRLWGLFCSSRLLNATCDEYFTR
NNVTEIQGIPGAASGLIKENLWSSYLTKGVIVERRGMPSVGLADSTPVDMDHPYVFSDMT
SYFTLLVGIYFPSVTGIMAGSNRSGDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACI
EGVVLRDKFGEAVNGNLVVGTLAWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDG
IVPFLQVFGHGKANGEPTWALLLTACICEIGILIASLDEVAPILSMFFLMCYMFVNLACA
VQTLLRTPNWRPRFRYYHWTLSFLGMSLCLALMFICSWYYALVAMLIAGLIYKYIEYRGA
EKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLVRVDQDQNVVHPQLLSLTSQ
LKAGKGLTIVGSVLEGTFLDNHPQAQRAEESIRRLMEAEKVKGFCQVVISSNLRDGVSHL
IQSGGLGGLQHNTVLVGWPRNWRQKEDHQTWRNFIELVRETTAGHLALLVTKNVSMFPGN
PERFSEGSIDVWWIVHDGGMLMLLPFLLRHHKVWRKCKMRIFTVAQMDDNSIQMKKDLTT
FLYHLRITAEVEVVEMHESDISAYTYEKTLVMEQRSQILKQMHLTKNEREREIQSITDES
RGSIRRKNPANPRLRLNVPEETACDNEEKPEEEVQLIHDQSAPSCPSSSPSPGEEPEGDG
ETDPEKVHLTWTKDKSVAEKNKGPSPVSSEGIKDFFSMKPEWENLNQSNVRRMHTAVRLN
EVIVNKSRDAKLVLLNMPGPPRNRNGDENYMEFLEVLTEQLDRVMLVRGGGREVITIYS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaggttcacggtcacctcgctgccccccgcagcgtccgccgcctccgctgac
ccagagtcccgccggcattcggtggccgacccccgccggctcccgagggaagacgtcaaa
ggtgatggcaaccccaaagagagcagtcccttcatcaacagcacggacacggagaagggc
agagagtacgatggcaggaacatggccctgtttgaggaggagatggacaccagccccatg
gtatcctccctgctcagtgggctggccaactacaccaacctaccccagggaagtagagag
catgaagaagcagaaaataatgagggtggaaaaaagaagccggtgcaggctcctcgaatg
ggcaccttcatgggtgtgtacctgccgtgcctgcagaacatctttggtgtcatcctcttc
ctgcggctcacgtgggtggtgggcatcgcgggcatcatggagtccttctgtatggtcttc
atctgctgctcctgtacgatgctcacagccatttccatgagtgcaatcgcaaccaatggt
gttgtgcctgctggtggctcgtactacatgatttccaggtctctgggcccggagtttggg
ggcgccgtgggcctctgcttctacctgggcaccacctttgctggggctatgtacatcctt
ggcacgatcgagatcctgctggcttatctcttcccagctatggccatcttcaaggcagaa
gatgccagtggggaggcagccgccatgctgaacaacatgcgggtgtacggcacctgtgtg
cttacctgcatggccaccgtagtctttgtgggtgtcaagtacgtcaacaagtttgccttg
gtcttcctgggttgcgtcatcctgtccatcctggccatctatgcaggggtcatcaagtct
gccttcgacccacccaatttcccgatctgcctcctggggaaccgcacgctgtctcgccat
ggctttgatgtctgtgccaagctggcttgggaaggaaatgagacagtgaccacacggctc
tggggccttttctgctcctcccgcctcctcaatgccacctgtgatgagtacttcacccga
aacaatgtcacagagatccagggcattcctggtgctgccagtggtctcatcaaagagaac
ctgtggagttcttacctgaccaaaggggtgattgtggagaggcgcgggatgccctccgtg
ggcctggcagacagtacccccgtagacatggaccacccctatgtcttcagtgatatgacc
tcctacttcaccctgctcgttggcatctacttcccctcagtcacagggatcatggctggc
tcaaaccgatctggagacctgcgggatgcccagaagtctatccctactggaactatactg
gccattgctaccacctctgctgtctacatcagctctgttgttctgtttggagcctgcatc
gagggggtcgtcctacgggacaagtttggggaagctgtgaatggcaacctggtggtgggc
accctggcctggccttctccctgggtcatcgtcataggctctttcttctctacctgtggg
gctggattacagagcctcacaggggccccacgcctgctgcaggccatctcccgggatggc
atagtgcccttcctgcaggtctttggccacggcaaagctaatggagagccaacctgggcg
ctgctgctgactgcctgcatctgtgagatcggcatcctcatagcctccctggatgaggtc
gcccctatactttccatgttcttcctaatgtgttacatgtttgtgaacttggcttgcgcg
gtgcagacgctgctgaggacgcccaactggaggccacgctttcgctattaccactggact
ctctccttcctgggcatgagcctctgcctagccctcatgttcatttgctcctggtactac
gcactggtggccatgctcattgctggactcatttataagtacatcgagtaccggggggca
gagaaggagtggggggatggaatccgaggcctgtctctcagtgcagcgcgctatgctctc
ttgcgcctggaggaaggacctccgcatacgaagaactggaggccccagctgctggtgctg
gtgcgtgtggaccaggatcagaacgtggtgcatccgcagctgctctccctgacctcccag
ctcaaggcagggaagggcctgaccatcgtgggctcggtccttgagggcacctttctggac
aaccaccctcaggctcagcgggcagaggagtctatcaggcgcctgatggaggctgagaag
gtgaagggcttctgccaggtagtgatctcctccaacctgcgtgatggtgtgtcccacctg
atccagtctgggggcctcgggggattgcaacacaataccgtgctggtgggctggcctcgc
aactggaggcagaaggaggatcatcagacatggaggaacttcatcgaactggtccgggaa
actacagccggccacctcgccctgctggtcaccaagaatgtttccatgtttcccgggaac
cctgagcgcttctcggagggcagcattgacgtgtggtggattgtgcacgacgggggcatg
ctcatgctgctgcccttcctgctgcgacaccacaaggtctggaggaaatgcaaaatgcgg
atcttcaccgtggcccagatggacgataacagtatccagatgaagaaggacctgaccacg
tttttgtaccacttacgcattactgcagaggtggaggtggtggagatgcatgagagcgac
atctcggcatacacctacgagaagacattagtaatggagcaacgatctcagatcctcaaa
cagatgcacctcacgaagaatgagcgggaacgggagatccagagcatcacagatgagtct
cggggctccattcggaggaagaatccagccaacccccggctccgcctcaatgttcccgaa
gagacagcgtgtgacaatgaggagaagccagaggaggaggtgcagctgatccatgaccag
agtgctcccagctgccctagcagctcgccatctccaggggaggagcccgagggggacggg
gagacagacccagagaaggtgcatcttacctggaccaaggataagtcagtggcagagaag
aataaaggccccagtcccgtctcctccgagggcatcaaggacttcttcagcatgaagccg
gagtgggaaaacttgaaccagtccaacgtgcggcgcatgcacacagctgtgcggctgaac
gaggtcatcgtcaataaatctcgggatgccaagctagttttgctcaacatgcccgggcct
ccccgcaaccgcaatggggatgaaaactacatggaattcctggaggtcctcactgagcaa
ctggaccgggtgatgctggtccgcggtggcggccgagaggtcatcaccatctactcctga
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