Mus caroli (Ryukyu mouse): 110308520
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Entry
110308520 CDS
T05910
Symbol
Polk
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03460
Fanconi anemia pathway
mcal05169
Epstein-Barr virus infection
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05210
Colorectal cancer
mcal05212
Pancreatic cancer
mcal05213
Endometrial cancer
mcal05214
Glioma
mcal05216
Thyroid cancer
mcal05217
Basal cell carcinoma
mcal05218
Melanoma
mcal05220
Chronic myeloid leukemia
mcal05222
Small cell lung cancer
mcal05223
Non-small cell lung cancer
mcal05224
Breast cancer
mcal05225
Hepatocellular carcinoma
mcal05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110308520 (Polk)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110308520 (Polk)
05202 Transcriptional misregulation in cancer
110308520 (Polk)
09162 Cancer: specific types
05210 Colorectal cancer
110308520 (Polk)
05212 Pancreatic cancer
110308520 (Polk)
05225 Hepatocellular carcinoma
110308520 (Polk)
05226 Gastric cancer
110308520 (Polk)
05214 Glioma
110308520 (Polk)
05216 Thyroid cancer
110308520 (Polk)
05220 Chronic myeloid leukemia
110308520 (Polk)
05217 Basal cell carcinoma
110308520 (Polk)
05218 Melanoma
110308520 (Polk)
05213 Endometrial cancer
110308520 (Polk)
05224 Breast cancer
110308520 (Polk)
05222 Small cell lung cancer
110308520 (Polk)
05223 Non-small cell lung cancer
110308520 (Polk)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110308520 (Polk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110308520 (Polk)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110308520 (Polk)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
110308520 (Polk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
Nairovirus_NSm
Motif
Other DBs
NCBI-GeneID:
110308520
NCBI-ProteinID:
XP_021036618
Ensembl:
MGP_CAROLIEiJ_G0018805
UniProt:
A0A6P5QXS3
LinkDB
All DBs
Position
13:complement(90127636..90190391)
Genome browser
AA seq
853 aa
AA seq
DB search
MDNTKEKDNNFKDDLLLRMGLNDNKAGMEGLDKEKINKIIMEATKGSKFYGNELKKEKQV
NQRIENMMQQKAQITSQQLRKARLQVDRFAMELERNRNLNNTIVHVDMDAFYAAVEMRDN
PELKDKPIAVGSMSMLATSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKE
VKEILAEYDPNFMAVSLDEAYLNITQHLQERRDWPEDKRRYFIKMGNYLEIDTPRQEANE
LTEYERSISPLLFEDSPPDLQPQGSPFQLNSEEQNSPQIAQNPVVFGTSAEEVVKEIRFR
IEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSSVMDFIKDLPIRKVSGIGKV
TEKMLMALGIATCTELYQQRALLSLLFSETSWHYFLHIALGLGSTDLARDGERKSMSVER
TFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVKTRASTVPAAIST
AEEIFAIAKELLRTEVNVGSPHPLRLRLMGVRMSTFSSEDDRKHQQRSIIGFLQAGNQAL
SSTGDSLDKTDKTELAQPLEMSHTKSFFDKKRSERISNCQDTSRCKTAGQQALQILEPSQ
ALKKLSESFETSENSNDCQTFICPVCFREQEGVSLEAFNEHVDECLDGPSTSENSKISCY
SHASSADIGQKEDVHPSIPLGEKRRHENGEITSVDGVDLTGMEDRSLKAASMDTLENNRS
KEEYPDIPDKSCPISLANETISALSRQESIQPCTDEVVTGQALVCPVCNLEQETSDLTLF
NIHVDICLNKGIIQELRNSEGNSVKQPKESSRSTDRLQKASGRTKRPGMKTKSSTSKKTK
PRDPRHTLDGFFK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggataacacaaaggaaaaggacaacaacttcaaagacgacctcctgctccgcatggga
ctaaacgataacaaggcaggcatggaagggttggataaggagaaaattaacaaaattatc
atggaagccacaaaggggtccaaattttatggaaatgagctcaagaaggaaaagcaagtc
aatcaacgaattgaaaatatgatgcaacaaaaagctcaaattaccagccagcagctaagg
aaagctcgattgcaggttgacagatttgcaatggagttagaacggaaccggaatttgaac
aataccatcgttcatgttgacatggatgctttctatgcagctgtcgaaatgagggacaac
ccggagctgaaggataaacccattgctgtaggatccatgagcatgttggctacttcaaat
taccatgcaaggaggtttggtgtccgtgcagccatgccaggatttattgctaagaggctc
tgcccacaacttattatagtgcccccaaactttgacaaatatagagctgtgagtaaggag
gttaaggagatactggctgaatatgatcccaattttatggctgtgagtctggacgaagcc
tacttgaatataacacagcacttgcaggaaaggcgagattggcctgaggacaaaaggaga
tatttcatcaaaatggggaactacttagaaatcgacacacccagacaggaagctaacgag
ctgactgagtatgagcggtccatctccccgctgctttttgaagatagtcctcctgatttg
caaccccaaggaagtcctttccaactgaactctgaagaacaaaacagtcctcaaatagcc
caaaatccagttgtttttggaacatcagctgaggaagtggtaaaggaaattcgcttcaga
attgaacaaaaaacaacgctgacagccagcgcaggcatcgcccccaatacaatgttagca
aaagtgtgcagtgataagaataagccgaacggacagtaccagatccttcccagcaggagc
tcggtgatggacttcatcaaggacctgcctattagaaaggtttctggaataggaaaagtt
acagagaaaatgttaatggctctcgggattgctacttgcacggaactctaccaacagaga
gcgttgctgtctctccttttctctgaaacatcttggcattattttcttcacatcgcactg
ggtctaggttcaacagacctggcaagggatggagaaaggaaaagcatgagtgttgaaagg
acattcagtgagataagtaagacagaggaacagtacagcctgtgccaagaactgtgcgct
gagctcgcccacgacctccagaaggaaggacttaagggaagaactgttaccattaagctg
aagaacgtgaattttgaagtaaaaactcgtgcatctacagttccggccgccatttctact
gcagaggaaatatttgccattgccaaggagctgctaaggacagaagttaatgtgggttcg
ccacaccccctgcggttaagactgatgggtgtccgaatgtctactttttccagtgaagat
gacaggaaacaccaacaaaggagcatcattggtttcttacaagctggaaaccaagctttg
tcatctactggggatagtctagacaaaactgacaaaactgagcttgcacagcccttagaa
atgtctcatacgaagagtttctttgataaaaagcgatcagaaagaatttccaactgtcaa
gacacatccagatgtaaaactgcgggtcagcaagctttacagatcttggaaccatcccaa
gcattaaagaagctgagcgagagttttgaaacatcagagaattcaaatgactgtcagaca
tttatatgtccagtttgctttagggagcaagaaggtgtcagtctggaagcctttaatgaa
catgtagatgagtgtcttgatggaccgtcaaccagtgagaactcaaaaatatcctgttac
tcacatgcttcctctgcagacattggtcagaaggaagatgtacacccctctattccactg
ggtgagaaacggaggcatgaaaatggagagatcacttcagtagatggtgtagatctaaca
gggatggaagacagatcattgaaagcagcaagtatggacactctagagaataatcgcagc
aaagaggaatatcctgatattccagacaagtcttgtcctatatcactggcaaatgaaacc
atcagtgcattaagtaggcaagaatctatccagccttgtacagatgaggtagtaacagga
caagctctagtgtgtcctgtttgtaacctagaacaagagacttctgatcttaccctcttc
aacatacatgtggatatttgcttaaataaaggtattatccaagaactgagaaatagtgaa
ggtaattcagttaaacaacccaaagaaagctcgagaagtactgacagacttcagaaggct
tcaggaaggaccaaaaggccaggaatgaagacaaagagctcaacatcgaagaaaacaaag
ccccgagatcccagacacacccttgatggattttttaaatga
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