Mus caroli (Ryukyu mouse): 110310465
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Entry
110310465 CDS
T05910
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04217
Necroptosis
mcal04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110310465
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110310465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110310465
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
110310465
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
110310465
NCBI-ProteinID:
XP_021039110
Ensembl:
MGP_CAROLIEiJ_G0019922
UniProt:
A0A6P5R337
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Position
15:complement(70295423..70299423)
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AA seq
376 aa
AA seq
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MSPPAGGAAVAADPASPVVLLAVHAAVRPLGAGQDAEAQPRKLQLKADPDRPGRFRLGLL
GTEPGAVSLEWPLEAICYTVRGPNQHELQPPPGGPGTLSVHFLDPEEAQQWAALVRDATA
EGQNGSGSPAPAMCPISPPCSSMAQIPKATQPEVDLPQSSGNFKKEELATRLSQAIAGGD
EKAAAQVAAVLAQHHVALNVQLMEAWFPPGPIRLQVTVEDATSVLSSSSSAHVSLKIHPH
CSIAALQEQVFSEFGFPPAVQRWVIGRCLCMPERSLASYGVSQDGDPAFLYLLSAPREVS
GQSLQNSKMDRKLGLLPQSLGLPHDLQPSSSSLPSPSQPGWSCPSCTFINASNRPGCEMC
STQRPCAWDPLAAAST
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcccgccggcggtgcggcagtggctgcagaccctgcctcacctgtggtgctc
ctggcagtgcacgcggcggtcaggcccctgggcgctggacaggatgccgaagcgcagccg
cggaagctgcaattgaaagccgaccctgatcggcctggacgcttccggctaggactgtta
ggcaccgagcctggggcggtcagtttagaatggcccttggaggctatttgttacaccgtc
cgtgggcctaaccaacacgagctgcagcctccccctggaggtcctggaaccttgagcgtg
cacttcctcgaccccgaggaagcacagcagtgggcagcactggtgcgagatgccaccgca
gaaggacaaaatggcagtggcagcccagccccagcaatgtgccccatttctccaccatgt
tcgtctatggctcaaatacctaaagcaacccaacctgaggtggatcttcctcaaagttct
ggaaacttcaaaaaagaagagctggctacacgcctgtcccaggccattgcaggtggggat
gagaaagcagcagcccaagtggcagcagtcctggcacagcatcatgtggctctcaatgtc
cagctcatggaggcctggttcccaccaggtcccataaggctacaagtcacagttgaagat
gccacatcggttttgtcctcttcatcgtctgcccatgtctcactgaagatccacccacat
tgctccatcgcagccctccaggaacaggtgttctcagagttcggtttcccaccagctgtg
cagcgctgggtcattgggcggtgcctgtgtatgcctgaacgaagccttgcttcctatggg
gtctctcaagatggagaccctgcttttctttacttgctctcggcccccagagaagtttca
ggacaaagccttcaaaactccaagatggacaggaaattaggcttgcttcctcagtcactg
gggctgcctcatgacctccagccgtccagttccagtctcccaagtccctctcagcctggc
tggtcttgcccttcctgcactttcatcaatgcctcaaaccgccctggctgtgagatgtgt
agcacccaaaggccctgtgcttgggatccccttgctgcagcttccacctag
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