KEGG   Mus caroli (Ryukyu mouse): 110310465
Entry
110310465         CDS       T05910                                 
Name
(RefSeq) sharpin
  KO
K20894  shank-associated RH domain-interacting protein
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04217  Necroptosis
mcal04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110310465
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    110310465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110310465
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   LUBAC complex
    110310465
SSDB
Motif
Pfam: Sharpin_PH Zn_ribbon_RanBP ubiquitin
Other DBs
NCBI-GeneID: 110310465
NCBI-ProteinID: XP_021039110
Ensembl: MGP_CAROLIEiJ_G0019922
UniProt: A0A6P5R337
LinkDB
Position
15:complement(70295423..70299423)
AA seq 376 aa
MSPPAGGAAVAADPASPVVLLAVHAAVRPLGAGQDAEAQPRKLQLKADPDRPGRFRLGLL
GTEPGAVSLEWPLEAICYTVRGPNQHELQPPPGGPGTLSVHFLDPEEAQQWAALVRDATA
EGQNGSGSPAPAMCPISPPCSSMAQIPKATQPEVDLPQSSGNFKKEELATRLSQAIAGGD
EKAAAQVAAVLAQHHVALNVQLMEAWFPPGPIRLQVTVEDATSVLSSSSSAHVSLKIHPH
CSIAALQEQVFSEFGFPPAVQRWVIGRCLCMPERSLASYGVSQDGDPAFLYLLSAPREVS
GQSLQNSKMDRKLGLLPQSLGLPHDLQPSSSSLPSPSQPGWSCPSCTFINASNRPGCEMC
STQRPCAWDPLAAAST
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcgccgcccgccggcggtgcggcagtggctgcagaccctgcctcacctgtggtgctc
ctggcagtgcacgcggcggtcaggcccctgggcgctggacaggatgccgaagcgcagccg
cggaagctgcaattgaaagccgaccctgatcggcctggacgcttccggctaggactgtta
ggcaccgagcctggggcggtcagtttagaatggcccttggaggctatttgttacaccgtc
cgtgggcctaaccaacacgagctgcagcctccccctggaggtcctggaaccttgagcgtg
cacttcctcgaccccgaggaagcacagcagtgggcagcactggtgcgagatgccaccgca
gaaggacaaaatggcagtggcagcccagccccagcaatgtgccccatttctccaccatgt
tcgtctatggctcaaatacctaaagcaacccaacctgaggtggatcttcctcaaagttct
ggaaacttcaaaaaagaagagctggctacacgcctgtcccaggccattgcaggtggggat
gagaaagcagcagcccaagtggcagcagtcctggcacagcatcatgtggctctcaatgtc
cagctcatggaggcctggttcccaccaggtcccataaggctacaagtcacagttgaagat
gccacatcggttttgtcctcttcatcgtctgcccatgtctcactgaagatccacccacat
tgctccatcgcagccctccaggaacaggtgttctcagagttcggtttcccaccagctgtg
cagcgctgggtcattgggcggtgcctgtgtatgcctgaacgaagccttgcttcctatggg
gtctctcaagatggagaccctgcttttctttacttgctctcggcccccagagaagtttca
ggacaaagccttcaaaactccaagatggacaggaaattaggcttgcttcctcagtcactg
gggctgcctcatgacctccagccgtccagttccagtctcccaagtccctctcagcctggc
tggtcttgcccttcctgcactttcatcaatgcctcaaaccgccctggctgtgagatgtgt
agcacccaaaggccctgtgcttgggatccccttgctgcagcttccacctag

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