Mus caroli (Ryukyu mouse): 110312299
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Entry
110312299 CDS
T05910
Symbol
Nlrc4
Name
(RefSeq) NLR family CARD domain-containing protein 4
KO
K12805
NLR family CARD domain-containing protein 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04621
NOD-like receptor signaling pathway
mcal05132
Salmonella infection
mcal05134
Legionellosis
mcal05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110312299 (Nlrc4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110312299 (Nlrc4)
05135 Yersinia infection
110312299 (Nlrc4)
05134 Legionellosis
110312299 (Nlrc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110312299 (Nlrc4)
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110312299 (Nlrc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nlrc4-like_WHD
NLRC4_HD
NACHT
CARD
AAA_16
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
110312299
NCBI-ProteinID:
XP_029326773
Ensembl:
MGP_CAROLIEiJ_G0021877
UniProt:
A0A6P7Q9A5
LinkDB
All DBs
Position
17:complement(70336591..70370166)
Genome browser
AA seq
993 aa
AA seq
DB search
MNFIRNNRPALIQRMGLTVTRQICDDLLELNVLNNQEADLIYCEPLEREAARKIIHMTMQ
KGSAACNLFLKSLENWDYFVYQDLTGQNLSYQVTEEDLNVLAQNLKDLYNSPAFLNFYPL
GEDIDIIFNLEKTFTEPIMWKKDHRHHRVEQLTLGSLLEALKSPCLIEGESGKGKSTLLQ
RIAMLWASGACRALKGFKLVFFIHLRSARGGLFETLYDQLLNIPDSISKPTFKTLLLKLH
KEVLFLLDGYNEFHPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRHVGALTAEVGDM
TEDSAKVLIEAVLVPDQVERLWFQIQKSRCLRNLMKTPLFVVITCAIQMGRQEFQAHTQT
MLFQTFYDLLIQKNSHRYRGGASGDFARSLDYCGDLALEGVFAHKFDFELEHGSSMNEDI
LVTIGLLCKYTAQRLKPTYKFFHKSFQEYTAGRRLSSLLTSKEPEEVSKGNSYLNKMVSI
SDITSLYGNLLLYTCGSSTEATRAVMRHLAMVYQHGSLQGLSVTKRPLWRQESIQSLRNT
TEQEVLKAINVNSFVECGINLFSESMSKSVLSQEFEAFFQGKSLYINSENIPDYLFDFFE
YLPNCASALDFVKLDFYERATESQNKAEENVPGVHTEGPSETYIPPRAVSLFFNWKQEFK
TLEVTLRDISKLNKQDIKYLGKIFSSATNLRLYIKRCAAMAGRLSSVLRTCKNMHTLMVE
ASPLTTDDEQYITSVTDLQNLSIHHLHTQQLPAEGLRSLKKMRLLHLTHLSDIGEGMDYI
VKSLSEEPCDLQEMKLVACCLTANSVKVLAQNLHNLIKLSIFDISENYLEKDGNEALQEL
IGRLGVLEELTALMLPWCWDAHTSLPKLLKQLEGTPGLAKLGLKNWRLRDEEIKSLGEFL
EMNSLRDLQQLDLAGHRVSSDGWLYFMNAFENLKQLVFFDFSTEEFLPDAALVRKLSQVL
SKLTLLQEVRLTGWEFDVYDISAIKGTFKLVTA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcataaggaacaacagaccagcccttattcaaaggatgggtttaacagttacc
aggcaaatctgcgatgacctccttgaattgaacgttctcaacaatcaagaagctgacctc
atttattgtgagcccttggagcgggaagctgcccgaaagatcatccatatgactatgcag
aagggctcagcggcctgcaacctctttcttaagagtcttgaaaactgggactattttgtg
tatcaggacttaactggacaaaatctttcttatcaggtcacagaagaagacctgaatgtt
ttggcccagaatttaaaggacttgtacaacagccctgcttttctgaacttctaccccctg
ggtgaagatatcgacataatttttaatctggagaaaaccttcacagaacctatcatgtgg
aagaaggaccatcgtcatcaccgtgtggagcagctgactttgggcagcctgctggaggct
ctgaagagcccctgcctgattgaaggcgagtctggcaaagggaagtccaccctgctgcag
agaatcgctatgctctgggcctctggggcttgcagggctctgaaggggttcaaattggtc
ttcttcatccacctgagaagcgccagggggggactatttgaaacactgtacgatcagctc
ctgaacatacctgactccatcagcaagccgaccttcaagactctgctgctgaagctacac
aaggaggtcctctttcttcttgatggttacaatgaattccatccccagaactgcccagaa
attgaagccctgatcaaggaaaaccatcgcttcaagaacatggtcattgtcaccaccacc
acggagtgcctgaggcatatcagacatgttggcgccctaactgcggaggtgggagatatg
accgaagacagtgccaaagttctcatcgaggcagtgttggtacctgatcaggttgaacgc
ctgtggttccaaatccagaagtccaggtgcttgagaaatctgatgaagacccctctcttt
gtggtgatcacctgtgcaattcagatgggcagacaggaattccaagctcacacccaaacc
atgctgttccaaaccttctacgacctcctgatacagaaaaacagccacagatacagaggt
ggagcttcaggtgattttgccaggagcctagactactgtggagacctggccctagaaggt
gtgttcgcccacaaatttgattttgaactggagcatgggtccagcatgaacgaggacatc
ctggtgacaatagggctcctctgtaagtacacagctcagaggctgaagcccacgtataag
ttttttcataaatcatttcaggagtacacggcaggtcggagactcagcagtttgctgacg
tccaaagagccagaggaggtgagcaaggggaacagctacttaaacaaaatggtttccatc
tctgacatcacatccctatatggcaatctgctcctctacacgtgtgggtcgtccacagaa
gcaaccagggcggtcatgaggcaccttgcaatggtttatcagcatggcagcctacaagga
ctttctgtcaccaagaggcctctctggaggcaggaatcaatccagagcctgagaaatacc
actgagcaagaggttctgaaagccatcaatgtcaattccttcgtagagtgtggcatcaat
ttattctcagagagtatgtctaaatcagtcctgagccaagaatttgaagctttctttcaa
ggtaaaagtttatacatcaactcagagaacatccctgactatttatttgacttctttgaa
tacttgcctaattgtgcaagcgcattggacttcgtgaagctggatttctatgaaagagct
acagagtcacagaacaaggcagaagagaatgtccctggtgttcacacagaagggccctca
gaaacctatattccccccagggctgtgtctttgttcttcaactggaagcaggaattcaag
actctagaggtcacactccgagatattagcaagttgaataaacaagatatcaaatatctg
gggaagatattcagctctgccaccaacctccggctgtatatcaagagatgtgcagccatg
gctggaaggctcagctcagtcctcagaacctgcaagaacatgcataccctcatggtggaa
gccagtcccctcaccacggatgacgaacagtacatcacatctgtgacagacctccagaac
ttaagtattcaccacttgcacactcaacagctgccagccgaaggcctgcgaagcctgaag
aagatgcgtttactccatttgactcatttgtctgacattggggaggggatggattacata
gtcaagtctctctcagaagaaccctgtgatctccaagagatgaagttggtggcctgctgt
ctgactgcaaactctgtgaaagttctagcacagaatcttcacaatttgatcaagctgagc
atttttgatatatcagaaaattacctggaaaaggacggaaatgaagctctacaggaactg
atcggcaggcttggcgttctggaagagctcactgcattgatgctgccttggtgctgggat
gcgcacaccagcctgcccaagctgttgaagcagttggaggggaccccaggacttgccaaa
cttggattgaaaaactggagactcagagacgaagagattaaaagtttaggtgaatttctg
gagatgaattctctgagagacttgcagcagttggatttagcggggcaccgtgtgagcagt
gacggatggctttacttcatgaatgcttttgagaatctgaagcagttagtgttttttgac
tttagcactgaagagttcttaccagatgcagcactggtgaggaagcttagtcaagtgtta
tccaagttaactcttctgcaagaggtaaggctcacgggctgggagtttgatgtctatgat
attagtgctattaaaggcacctttaaactagtgactgcttaa
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integrated database retrieval system
