Mus caroli (Ryukyu mouse): 110312714
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Entry
110312714 CDS
T05910
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
KO
K06752
MHC class II antigen
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04145
Phagosome
mcal04514
Cell adhesion molecules
mcal04612
Antigen processing and presentation
mcal04640
Hematopoietic cell lineage
mcal04658
Th1 and Th2 cell differentiation
mcal04659
Th17 cell differentiation
mcal04672
Intestinal immune network for IgA production
mcal04940
Type I diabetes mellitus
mcal05140
Leishmaniasis
mcal05145
Toxoplasmosis
mcal05150
Staphylococcus aureus infection
mcal05152
Tuberculosis
mcal05164
Influenza A
mcal05166
Human T-cell leukemia virus 1 infection
mcal05168
Herpes simplex virus 1 infection
mcal05169
Epstein-Barr virus infection
mcal05310
Asthma
mcal05320
Autoimmune thyroid disease
mcal05321
Inflammatory bowel disease
mcal05322
Systemic lupus erythematosus
mcal05323
Rheumatoid arthritis
mcal05330
Allograft rejection
mcal05332
Graft-versus-host disease
mcal05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110312714
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110312714
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
110312714
04612 Antigen processing and presentation
110312714
04658 Th1 and Th2 cell differentiation
110312714
04659 Th17 cell differentiation
110312714
04672 Intestinal immune network for IgA production
110312714
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110312714
05164 Influenza A
110312714
05168 Herpes simplex virus 1 infection
110312714
05169 Epstein-Barr virus infection
110312714
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
110312714
05152 Tuberculosis
110312714
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110312714
05140 Leishmaniasis
110312714
09163 Immune disease
05310 Asthma
110312714
05322 Systemic lupus erythematosus
110312714
05323 Rheumatoid arthritis
110312714
05320 Autoimmune thyroid disease
110312714
05321 Inflammatory bowel disease
110312714
05330 Allograft rejection
110312714
05332 Graft-versus-host disease
110312714
09166 Cardiovascular disease
05416 Viral myocarditis
110312714
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
110312714
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110312714
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110312714
Exosomal proteins of epithelial cells
110312714
Exosomal proteins of breast milk
110312714
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Motif
Other DBs
NCBI-GeneID:
110312714
NCBI-ProteinID:
XP_021042216
Ensembl:
MGP_CAROLIEiJ_G0021443
UniProt:
A0A6P5RGF4
LinkDB
All DBs
Position
17:30456904..30470471
Genome browser
AA seq
261 aa
AA seq
DB search
MEHEQKSGAVLLRLLRLLWLLPHSWAVLEASTPVLWDGPQNHTFRHTLFCQDGIPNIGLS
ETYDEDELFSFDFSQNTRVPRLPDFAEWAQGQGDASAIAFDKSFCEMLMREVSPQLEGQI
PVSRGLPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWQLHSAPVEGASPTSISAVD
GLTFQAFSYLNFTPEPFDLYSCTVTHEIDRYTAIAYWVPQNALPSDLLENALCGVAFGLG
VLGTIMGIVFFLCSQRPCSGD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgagcagaagtcaggagctgtgctgctgaggctgctgcgccttctgtggctg
ctgccccactcctgggcggtgctcgaagcgtctaccccagtgttgtgggatggcccacag
aaccacacattccggcacactctgttctgccaggacgggattcccaacatagggctctcg
gagacctatgacgaggacgaactcttctccttcgacttctcccagaacaccagagtgccc
cgactgcctgactttgctgagtgggctcagggtcagggagatgcctctgccattgcattt
gacaaaagcttctgtgagatgttgatgcgggaagtgagcccgcagcttgaaggtcaaatc
ccagtgtccagaggtttgcctgtggcggaggtattcacactgaagcccctggagtttggc
aagcccaacacattggtctgtttcatcagcaacctctttccaccgaccctgaccgtgaac
tggcagcttcactcggcccctgtggagggagctagccccacgtccatctcagccgtcgat
gggctgaccttccaggctttctcttatttaaatttcacaccagaaccctttgacctttac
tcctgcacggtgacgcacgagattgaccgctacacggcaattgcctattgggtaccccag
aacgccctgccttcggatctcctagagaatgcactgtgtggtgtggcctttggcctcggt
gtgctaggcaccatcatgggtattgtcttcttcctctgctcccagagaccgtgctcaggt
gactga
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integrated database retrieval system