Methylacidiphilum caldifontis: IT6_02100
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Entry
IT6_02100 CDS
T09436
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
mcao
Methylacidiphilum caldifontis
Pathway
mcao01501
beta-Lactam resistance
mcao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT6_02100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IT6_02100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcao02000
]
IT6_02100
01504 Antimicrobial resistance genes [BR:
mcao01504
]
IT6_02100
Transporters [BR:
mcao02000
]
Other transporters
Pores ion channels [TC:
1
]
IT6_02100
Antimicrobial resistance genes [BR:
mcao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IT6_02100
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
IT6_02100
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
IT6_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Herpes_heli_pri
Motif
Other DBs
NCBI-ProteinID:
QSR89710
LinkDB
All DBs
Position
435512..436993
Genome browser
AA seq
493 aa
AA seq
DB search
MQSFEINRSFGFSFFVFIVILGLFLCGCATLPKDTRVAKPIDPPQIQQTLSTEFDHSSEK
LIQKWPSNNWWEAFHNPEMNRIITVALGKNPDLKASLARIHQAWAVAAGARSRYLPSFYS
TQFLFPVPFGVMQLPGSSFFGPFGDNSFFFWSVIPALANYHLDLWGEDKARVRAAIGMAR
ATEAEFAVARLFLSTTLASRYIRLASAEEELELARSGQQIIKELLQLVQMRKKSGIENLL
PVHTIEQRLQTITQQVNSLERETKILRDEIARLAGQGPDWGKTILAKEPHFPKRFPLPKS
LPLDLLGRRPDVAVSKWRAEALAHQVKVTKTAFYPNLDLVTLVGFETLNFATLFLNPALP
LLYIAGPAWNLPIFTAGRLSAELVVAQEEYNIAVENYNSTLLSAFQQVADALAVWKETDK
NLDSQEQSTAAAKSNVELSARLFSAGINTKTDLLDLQYSLIQSQITLSNRTAEHLEAAVG
LFLALGGGYDSIE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
attcaaagctttgaaataaataggtcttttgggttctccttttttgtttttatagttatc
ctaggcctttttctttgtggatgtgccactttacctaaagacactcgcgtagccaagccc
atagaccctcctcaaattcagcagaccctcagtactgagttcgatcattcctcagaaaag
ttaattcagaagtggccatcgaataactggtgggaagcctttcacaaccccgaaatgaat
cgaatcataactgtagctcttggaaaaaaccccgatttgaaagcctcattggcaaggata
catcaagcatgggcggttgctgcgggggctcggagtcgttatctcccttccttttattct
actcaatttctttttcccgtcccctttggagttatgcaacttccgggtagcagtttcttt
ggtccttttggggataatagcttttttttctggagtgtgatcccggcactggcaaactat
catcttgatctttggggtgaggataaagcccgggtgagggcagccattggaatggctagg
gctactgaggccgaatttgctgttgctcggctttttctgagcacaaccctagccagcaga
tatataagactggcttcggccgaagaagaattggaattagccagaagcggtcaacaaatt
atcaaggagttgctccaactcgttcagatgagaaaaaaaagcggtattgaaaacctcctt
ccagttcataccatcgaacaaagactgcaaacaataacccagcaggtcaatagcctcgaa
agagagacaaaaattcttcgggacgaaatagccagactcgcaggtcaagggcccgattgg
ggtaaaactatcctggcaaaagaaccccatttccccaagcgctttcccttacccaaatca
ctccctctcgatctgctgggtagaaggcctgatgtagccgtaagcaaatggagagctgaa
gctctcgctcaccaggttaaagtgacaaaaacagcattctatcccaatcttgacctagtg
actttggtgggcttcgaaaccctaaatttcgcaacattgtttctcaaccccgctttaccc
cttttatatattgctgggcctgcatggaatttgccgatttttacagcaggtcggctcagt
gcagaacttgtcgtggcccaagaagaatacaacatagccgtcgaaaattacaacagcacc
cttctttcagctttccagcaagtagccgatgctcttgcagtttggaaagaaacggataaa
aacctggattcccaagaacaatcaacagctgcagcaaaatccaatgttgagctttcagca
cggcttttttcagctggaataaatacgaaaactgatctgctggatttgcaatatagcctc
attcagtctcaaataacattaagtaatagaactgctgaacatttagaagcagcagtcggt
cttttcttagctttaggaggtggatatgactccattgaatga
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