Malus domestica (apple): 103405139
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Entry
103405139 CDS
T03194
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor 4
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103405139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103405139
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103405139
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103405139
NCBI-ProteinID:
XP_008342324
LinkDB
All DBs
Position
17:complement(join(12031742..12031746,12032391..12032520,12032634..12032927,12033010..12033075,12033167..12033232,12033317..12033421,12033509..12034400,12034549..12034619))
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AA seq
542 aa
AA seq
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MNSCIPEGNFEADLPLTNQKKSMGPDHELVELLWRNGQVVLNSQTHRKPSLNPNDQPRQV
QKHDQQSIRSGGLYGNSGSLIQDDDTVSLIHYPLEDSFDKEFCSHFFSELHSCGPIELDK
PIKQFEGDKFDASDTGRLVSNSPQPNVKSSAGVEYPANPMPPPRYHYINSTDQPNQNRGL
GKIVNFAQFATPGKLSAGSSRGQLGGKEAGDLAQAEVRECSVMTVGSSYAGSNQVLNELD
VSRASSNCDGTTGLSAGHFYDNVHKIMPQSETGKTDTLDQTLTSSSGGSGSSFGRGGKQS
NVVNSNKRKVRDAEDSECQSEAAELESASAAGSKSAHRSGSTRRSRAAEVHNLSERRRRD
RINEKMRALQELIPHSNKTDKASMLDEAIEYLKSLQMQLQVIWMGSGMAPMMFPGVQHYI
SQMGMGPPALPAMHNPVRLPRHPLVDQCMNVAPAPNQTVMCQPPVLNPVDYHNQVQNPSF
QEQYARLMNFHHMQTMSQPMNMFRFGSRPVQQNNQMMAANGVSSGPFGVGAATNDPLSGR
MS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcctgaggggaactttgaggctgatctccccttgaccaaccaaaag
aaatcaatggggccagaccatgaactagtcgagctcttgtggagaaatgggcaagtagtt
ttgaacagccaaacgcatcgaaaaccaagtcttaatccgaatgatcaaccgagacaagtt
cagaaacatgatcagcaatcaataaggtctggtgggttgtatgggaattcaggtagtctg
attcaagatgatgacacagtttcgcttatccactacccgcttgaggattctttcgacaaa
gagttttgctcccattttttctctgaattgcattcctgtggtccaattgagcttgacaag
ccaatcaaacagtttgagggagacaagtttgatgcttctgacaccgggcgtcttgtttcc
aattcaccgcagcctaatgttaagtcctctgctggtgtggaataccctgcaaatccaatg
cctcctccaagataccactacattaattcaactgatcagccgaaccaaaatagaggcttg
gggaaaatagttaattttgcgcaatttgcaaccccgggaaagctttctgcaggatcttcc
agaggacagttaggagggaaagaggccggagatttagctcaagcggaggttagagagtgt
tctgtgatgacggttggttcgagttatgctggtagcaaccaagttctaaatgaacttgat
gtgagcagggcttcaagcaattgtgatggaaccactggtttatcggctggacatttctat
gacaatgttcataagataatgcctcagagcgagacggggaaaacagatacgcttgatcaa
acgcttacttcgtcttctggtggttctggaagtagttttggcagaggaggaaagcagtct
aatgttgtcaacagcaacaagagaaaggttagagatgcagaggactcggagtgccaaagt
gaggctgctgaacttgagtcagcttcagctgcaggaagtaagtcagcgcatcgatcagga
tcgaccaggaggagtcgtgctgctgaagtccataacctctcagaaaggagacggagagat
cggattaacgagaaaatgagagcattgcaagagcttatacctcattctaacaagacagat
aaagcatcaatgttagatgaggcaattgaatacttgaagtcacttcagatgcaacttcag
gtaatttggatgggaagcgggatggcaccaatgatgtttccgggagtgcagcactatatt
tcccaaatgggaatgggaccgccggccttgcctgctatgcacaatccggtgcgtctacct
aggcacccgctcgttgatcagtgtatgaatgtggctccagcaccaaaccagactgtaatg
tgccaaccaccggtcttgaatcccgttgattaccacaaccaggtgcaaaatccctctttt
caggagcaatacgcgcgtctcatgaacttccatcacatgcagactatgtctcagccgatg
aatatgttcagatttggctcccgacctgtacaacagaataatcagatgatggcagcaaat
ggtgtcagcagtggacctttcggggtaggagctgcaactaatgaccctttaagtggaaga
atgagttaa
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integrated database retrieval system
