KEGG   Malus domestica (apple): 103405253
Entry
103405253         CDS       T03194                                 
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
mdm04120  Ubiquitin mediated proteolysis
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103405253
   04120 Ubiquitin mediated proteolysis
    103405253
  09124 Replication and repair
   03420 Nucleotide excision repair
    103405253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103405253
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103405253
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103405253
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103405253
  Multi subunit type E3
   SCF complex
    Ring finger protein
     103405253
   Cul2 complex
     103405253
   Cul3 complex
     103405253
   Cul4 complex
     103405253
   Cul7 complex
     103405253
   Cul8 complex
     103405253
   Cul9 complex
     103405253
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103405253
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103405253
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 103405253
NCBI-ProteinID: XP_008342455
UniProt: A0A498JHP5
LinkDB
Position
02:complement(join(18443126..18443163,18443277..18443348,18444402..18444461,18444557..18444607,18444714..18444846))
AA seq 117 aa
MATLDSDVPMIPAGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcaacactagactcagacgttccaatgattccggcgggcgagggttcgagcagtgca
ggtccttcgtcgaccaaaaagcccaagcgatttgagattaagaagtggaatgctgtagct
ctctgggcttgggatattgtggttgataactgtgccatttgcaggaaccatatcatggat
ctctgcattgagtgccaagcaaaccaggcaagtgccacaagtgaggagtgcacggttgct
tggggggtttgtaaccatgcattccacttccactgcataagccgatggctcaagacccga
caagtgtgcccattggataacagcgagtgggagtttcagaagtacggtcactaa

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