Malus domestica (apple): 103411497
Help
Entry
103411497 CDS
T03194
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103411497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103411497
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103411497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
103411497
NCBI-ProteinID:
XP_008348351
LinkDB
All DBs
Position
09:complement(join(11034514..11034518,11035243..11035369,11035494..11035805,11035892..11035957,11036048..11036113,11036200..11036304,11036393..11037296,11037376..11037446))
Genome browser
AA seq
551 aa
AA seq
DB search
MNSCIPEWNFESDLPLTNQKKPIGPDHELVELLWRNGQVVLNSQTHRKPSFNPNDQSRQV
QKHDQQSIRSGGLYGNSSNLIQDDDTVSLIHYPLEDSFDKEFCSHFFSELPSCDPIELDK
PIKQFEGEKVVKFDASDTARLVSNSPRPNGKSSAGVEYPANPMPPPRYQYINSTDQQNQN
QGGLGKIVNFSQFATPGKVSAGSSRGQLGGKESGNLAQAEVRECSVMTVGSSYVGSNQVL
NDLDVSRASSNCDGTTGLSAGHFYDNVHKIMPQSETGKTDTLDPTLTSSSGGSGSSFGRG
GNQSNVVNSNKRKGREAEDSECQSEAAELESASAARSKSAHRSGSTRRSRAAEVHNLSER
KRRDRINEKMRALQELIPHSNKTDKASMLDEAIDYLKSLQMQLQVMWMGSGMAPMMFPGM
QHYISRMGMGMGMGMGPPALPSMHNPMHLPRHPLVDQCMNMAPAANQTVMCQPPVLNPID
YHNQMQNPSFQEQYMRLMNFHHMQTMSQPMNMFRFGSQPLQQNQMMAPNGLSSGPFGGRA
ATNDPLSGKMS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcccgagtggaactttgagtctgatctccccttgaccaaccagaag
aaaccaatagggccagaccatgaacttgtagagctcttgtggagaaatgggcaagtagtt
ttgaacagccaaacgcatcgaaaaccaagttttaatccgaatgatcaatcgagacaagtt
cagaaacatgatcagcaatcaataaggtctggggggttgtatgggaattcaagtaatctg
attcaagatgatgacaccgtttcacttatccactacccgcttgaggattctttcgacaaa
gagttttgttcccattttttctctgaattgccttcctgtgatccaattgagcttgacaaa
ccaatcaaacagtttgagggagagaaggttgtgaagtttgatgcttctgacaccgcgcgt
cttgtttccaactcaccgcggcctaatggcaagtcctccgctggtgtggaataccctgca
aatccaatgcctcctccaagatatcaatacattaattcaactgatcagcagaaccaaaat
caaggaggcttggggaaaatagttaatttttcgcaatttgcaaccccgggaaaggtttca
gcaggatcttctagaggacagttaggagggaaagagtccggaaatttagcgcaagcggag
gttagggagtgttctgtgatgacggttggttcgagttacgttggtagcaaccaagttcta
aatgaccttgatgtgagcagggcttcaagcaattgtgatggaactactggtttatcggct
ggacatttctacgacaacgttcataagataatgcctcagagcgagacagggaaaacggat
acgcttgatccaacgcttacttcgtcttctggcggttctggtagtagttttggcagagga
ggaaaccagtctaatgttgtcaatagcaacaagagaaagggtagagaggcagaagactcg
gagtgccaaagtgaggctgctgaacttgaatcagcttcagctgcgagaagtaagtcagcg
catcgatcaggatcgaccaggaggagtcgtgctgctgaagtccataacctctcagaaagg
aaacggagagatcggattaacgagaaaatgagagcattgcaagagcttatacctcattct
aacaagacagataaagcatcaatgttagatgaggcaattgattacttgaagtcacttcag
atgcaactgcaggtaatgtggatgggaagcgggatggcaccaatgatgtttccgggcatg
cagcactatatttcccgaatgggaatgggaatgggaatgggaatgggaccgccggccttg
ccttctatgcacaatccgatgcatttacctaggcatccgctcgttgatcagtgcatgaat
atggctccagcagcaaaccagactgtaatgtgccaaccaccggtcttgaatcccattgat
taccacaaccagatgcaaaatccctcttttcaggaacaatacatgcgtctcatgaacttc
catcacatgcagactatgtctcagccaatgaatatgttcagatttggctcccaacctcta
caacagaatcagatgatggcaccaaatggtctcagcagtggacctttcggtggaagagct
gcaactaatgaccctttaagtggaaaaatgagttaa
DBGET
integrated database retrieval system
