Malus domestica (apple): 103431247
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Entry
103431247 CDS
T03194
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103431247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103431247
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103431247
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Arf
AAA_15
AAA_23
ORC-CDC6-like
Zeta_toxin
AAA_7
AAA_30
VapE-like_dom
nSTAND3
AAA
SRP54
AAA_28
Motif
Other DBs
NCBI-GeneID:
103431247
NCBI-ProteinID:
XP_008367610
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All DBs
Position
03:complement(31259053..31259601)
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AA seq
182 aa
AA seq
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MGVNPNSEPSIEINGLKFTYPGINGHPPPGSKPLIKYFNLTFNASDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTALTGSGDLSYLGREWRRDVAFAGFDVPIQMDVS
ADKLINGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPYKVLNFHVS
QF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaatccaaactccgagccgtcgatcgagatcaacggcctaaaattcacctac
ccaggaatcaacggccacccgccgccgggctccaagccgctgatcaagtacttcaatctc
acctttaacgccagcgaccgatgcctcctcgtcggatccaacggcgcggggaaaaccacg
atcttgaagatcctgggcggcaagcacatggtcgagccccacatggttcgcgtgctagga
aggtcggcgtttcacgacaccgccttgaccggatccggcgacctctcgtatctcggcaga
gagtggcggcgagatgtcgcattcgccgggtttgatgtcccgattcaaatggacgtttcg
gctgataagttgatcaatggggttgcggggatcgacccacaaaggagagcagagctgata
aaggttttggatattgatctttcatggcggttgcacaaggtgtccgatggtcagagaaga
cgagtgcaaatctgtatgggtctgctcaagccatacaaggtactcaatttccatgtttca
cagttttga
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