KEGG T03194: 103432714

Malus domestica (apple): 103432714

Entry

103432714         CDS       T03194

Name

(RefSeq) endonuclease III homolog 1, chloroplastic

K10773

endonuclease III [EC:3.2.2.- 4.2.99.18]

Organism

mdm Malus domestica (apple)

Pathway

mdm03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103432714
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103432714
Enzymes [BR:mdm01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     103432714
DNA repair and recombination proteins [BR:mdm03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     103432714
Prokaryotic type
     103432714

SSDB

Motif

Pfam:

HhH-GPD HHH HHH_5 EndIII_4Fe-2S Cdd1 HHH_8 RecR_HhH

Other DBs

NCBI-GeneID:

103432714

NCBI-ProteinID:

XP_008369130

LinkDB

Position

04:complement(join(4479327..4479470,4480197..4480280,4480451..4480555,4480630..4480767,4480952..4481043,4481591..4481657,4481974..4482101,4482597..4482660,4483893..4484005,4484149..4484296))

AA seq 360 aa
MLHVRVRSPSTLGFATARIQFNRMSKTRFSVKPIQSKTEIPTSDPDPNPGSENGSAAELR
VFSRRKRVKRTEEVQKLQLEAKPIAQKLAVLPDIEEFAYKKVNTSTNSIDTGKPPANWEK
VLDGIRKMRSSEDAPVDSMGCEKAGSSLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLL
QNGLLSADSIDKADEATIKSLIYPVGFYTRKAGNLKKVANICLTKYDGDIPSSLEELLSL
PGIGPKMAHLVMNVGWNDVQGICVDTHVHRICNRLGWVSRPGKKQKTSTPEQTREALQLW
LPKEEWDPINPLLVGFGQTICTPLRPRCGLCSVSEFCPSAFKEASSPSSKSKKSGLNKKL

NT seq 1083 nt +upstreamnt +downstreamnt
atgctacatgtccgtgtgagaagcccctccaccctcggctttgcaaccgctcgaatccaa
ttcaacagaatgtccaaaacgagattctctgtcaaacccattcaatccaaaacagagata
cccacttccgacccagacccaaacccaggctctgaaaacggttcagcagcagagcttcgt
gttttttcgaggagaaagagagtgaaaaggacagaagaagttcaaaaattacagcttgaa
gcaaaacccattgcccagaaactggctgtactacctgatattgaagaattcgcatacaaa
aaagtgaatacatctaccaattcaattgacacaggtaaaccacctgctaactgggagaaa
gtccttgatgggattcgcaaaatgaggtcttctgaagatgcaccagtagacagtatgggt
tgcgagaaagctggaagctctcttcctcctaaggaacgaagatttgctgtcttggtgtct
tctctcttgtcaagccaaacgaaggatcatgttaaccatggagcaattcagcgtttactt
caaaatggtctgctctctgctgattccattgataaagctgatgaagcaaccattaaaagc
ttgatttacccggttggattttatacaagaaaggctggtaacttaaagaaagttgcaaac
atttgtctcacgaagtatgatggagatatacctagctcgttggaggaactactctcactt
ccaggaataggtcctaagatggctcatttggttatgaatgttggttggaacgatgttcaa
ggtatttgtgtagatactcatgtgcaccgcatttgcaataggcttgggtgggtgtcacgg
ccaggaaaaaaacagaaaacttcaactcctgagcaaacgagagaggcattgcaattgtgg
cttccgaaggaagaatgggaccccataaaccctcttttggtaggatttggacagacaatt
tgcactcccctcagacctcgttgtggattgtgcagtgtgagcgagttttgcccatctgca
ttcaaagaggcttcaagtccgtcatccaagtcaaagaagtctggtttaaacaagaagctt
tga

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