Malus domestica (apple): 103433823
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Entry
103433823 CDS
T03194
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
mdm
Malus domestica (apple)
Pathway
mdm04075
Plant hormone signal transduction
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103433823
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103433823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103433823
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103433823
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103433823
NCBI-ProteinID:
XP_008370333
LinkDB
All DBs
Position
04:complement(join(27018753..27018845,27019109..27019630,27019737..27019802,27020148..27020213,27020333..27020434,27020521..27021754,27021893..27021951))
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AA seq
713 aa
AA seq
DB search
MPFSELYRMAGRVDSSQDFENDFLELVWENGQVVMQGQSSRTRKNPSCNTLPSYNTPKNR
DRDVGNSNIGKTGKFGFVVDSELDEIPLSVPSSEMGLSEDDDMLPWLNYSIDEPLHHEYC
HDFLPEFSSATANEASSNHNLASIDKRSSSSQVLRNSNPNSAHEDACLQQRNVGKVAISG
RADVSRPRTGTSQLYSLSSQQSQAAYPSFRSRVSDTAGDNTSATHRDVGKNSNQISSTGG
FPGMKMQRQDPVMPRNTNPSIMNFTHFSRPAALAKANVQNNGAMAGSGSSSMERIENKDK
FSAATRNNLPESTLIDSSSGAPKESNSQCQPILVRSSDELKATKAKPLEEPCTAKRSEAA
CQEETSKNDINANDKPCESASRVSPGREKTLEPVVASSVCSGNSVERGSDDPTHALKRKC
RETDESECHSDDVEDESVGVKKGAHARGKGSKRSRAAEVHNLSERRRRDRINEKMRALQE
LIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLSPGMQHMHGPRMAHFS
PMGVGMGMGMGLGMGFGMGMPDMNGASSSYPMLQVPPMQGAHFPGSHMAGHNAFNGMMGS
NLQMFGLPSQGVPMQMQCAPLAPSSGGPLVKSSAGPNAGSSGGPVENVESAPVSGSKDLV
QNMNSQVMQNNNANSSINPTSSQGQATNEGFGQTALVRNNVQAADANNNRANR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccgagctttatcggatggccggaagggttgattcaagtcaagattttgaa
aatgattttcttgagttggtatgggaaaatgggcaggttgtgatgcagggtcagtccagt
agaactaggaagaatccatcttgtaataccttaccgtcttataacaccccgaaaaatcga
gatagagatgtaggaaatagcaacattgggaagacagggaaatttgggtttgtggtggat
tctgaattggatgaaattccgttgtcggtgccatcttctgagatgggtttgagtgaggat
gatgacatgttgccttggttgaattattccattgatgagcctttacatcatgagtactgt
catgattttttgcctgaattttctagtgcaactgcaaatgaggcttcctccaatcataat
cttgcctcgatcgataagaggagtagttctagtcaggtgcttaggaattccaatcccaat
tctgcacatgaagatgcttgtttgcaacaaaggaatgtgggaaaggttgctataagcggc
cgtgctgatgttagcagacctagaactggtactagtcagttgtactcgttatcatcgcag
caatctcaagcagcgtatccatctttcagatcaagggtttcggatactgctggtgataat
actagtgccacccatcgtgatgttggcaagaattcaaatcagatttcatctacgggcggt
tttcctggaatgaaaatgcagaggcaagatccagtaatgcctagaaacactaatccatcc
ataatgaactttacccatttttcacggccagctgctcttgcaaaagctaatgttcagaac
aacggtgcgatggctggctcaggttcatcaagcatggaaaggattgaaaacaaggacaag
ttttcagctgcaaccaggaacaatctgcccgagtcaacgctaattgattcaagcagtggt
gcaccgaaggagtcaaattcacaatgccagccaattctagtgagatccagtgatgaattg
aaagcaacaaaagctaagcctctcgaggaaccatgtactgctaagcggtctgaggcggca
tgccaagaagaaacctctaagaatgacataaacgccaatgataaaccttgtgaaagtgct
agtagggtatctccaggtcgtgaaaaaactctggaacctgttgttgcttcttctgtttgc
tcaggcaatagtgtggagagaggttcagatgacccaacacatgctttgaagagaaaatgt
cgtgagactgacgagtctgaatgccatagtgatgacgtagaggatgaatctgtgggtgtc
aagaaaggagctcatgctcggggcaagggttccaagagaagcagagcagcagaagtgcat
aatttatcggaaaggaggcgaagggacagaatcaatgagaagatgcgtgcgctacaggaa
ctcataccgaattgcaataaggtggacaaagcttcaatgctcgatgaggctattgagtat
ttaaagacgcttcaactccaagtacagattatgtcaatgggagctggtatgtatatgcca
ccaatgatgttatcaccaggaatgcaacacatgcatggaccccgtatggctcatttctca
cccatgggtgttggaatgggaatgggaatgggattaggcatgggttttgggatgggtatg
cccgacatgaatggtgcatcttctagttaccctatgcttcaggtgccccccatgcaagga
gcacatttccctggttcacatatggcagggcacaacgccttcaatgggatgatgggatct
aaccttcagatgtttgggcttcctagtcaaggagttcctatgcagatgcaatgtgcgccc
ttagctccctcatcaggaggtccccttgtgaagtcatctgcaggaccaaatgcaggcagt
tcaggaggacctgtggaaaatgtggaatcagctccagtttctggttcaaaggatttggtt
cagaacatgaactctcaagtgatgcaaaacaacaatgccaatagctctatcaatccaaca
tctagtcagggccaagcaacaaatgagggatttggacagactgcattggtgcgaaataat
gttcaagcggctgatgctaacaacaacagagctaacagataa
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