KEGG   Malus domestica (apple): 103434145
Entry
103434145         CDS       T03194                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    103434145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103434145
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     103434145
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 103434145
NCBI-ProteinID: XP_008370675
LinkDB
Position
04:join(29574457..29574663,29575253..29575355,29575447..29575523,29575609..29575800,29575982..29576101,29576291..29576353,29576437..29576574,29576671..29576835,29577337..29577414,29578145..29578231,29578985..29579062,29579266..29579361,29579844..29579914,29580099..29580227,29580329..29580405,29580496..29580536,29580669..29580743,29581314..29581465,29581568..29581672,29581752..29581827,29582315..29582391,29582529..29583210)
AA seq 962 aa
MGVPAFYRWLADRYPQSIADVVEEHAREDSNGVPVPVDVSGPNPNGSEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSIFDYIDHLFTLVRPRKLLFLAIDGVAPRAKMNQQRSRRY
RASKDAAEAEAEEERLKKEFEMEGTSLPSKEKPETLDSNVITPGTQFMAVLSVALQYYIQ
SRLNHNPGWRSTKVILSDANVPGEGEHKIMSYIRLQRSLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITFPGQQEKCFLCGQVGHLAAECRGISDDNGNVVDDTPIHQKKYQ
FLNIWVLREYLQYELDIPNPPFQLNFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINL
LMHIYRTEFTAMGGYLTDAGEVLLDRVEHFIQSVAVFESQIFQKRVRIQQAIENNEERHR
ARRETSAELPAPVMDKVKLGEPGYTERYYAEKFQVSTPEEIDKVKKDLVLKYVEGLCWVC
RYYYQGVCSWIWYYPYHYAPFASDLKDLNELEITFFLGEPFKPFDQLMGTLPAASSSALP
EKYRNLMTDPRSPIHNFYPADFEIDMNGKRFAWQGVAKLPFINERKLVTETRKLESTLTE
EEQARNSVMLDLLYVYPSHPLAAQISMYYQQFYQTPLHERFLWRIDPIASGGMNGFLGLS
ERNGLRYVIPSPIRGYPDLDCNQVLNITYLNPADHKHIPEPPKGVILPRKVVRPTDIKPF
PTLWHDEGPRRQGRERPQIPGAIAGPMLGEAAHRLVKNTLNIKPNGSSPGLWDQPPLRNS
GNYAGNYPVNRPRPAGPSGYERVFREEATYGNSFNPQVMMARPRIPASNGMQGDRQNFRA
QERVQHQEQNFRTQDRVQDQEQYNLRSVMSSLTVQDSGRTRSPAAAPPGMPNSGYQANRK
HQFVQNMGALPSPPTKWISKEPTGNGGLHVRKQETGYGGACEQQQVKKVYQVKTRAPQDV
KP
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgggcgttcctgcgttttaccgctggctagcggatcggtacccacagtccatcgccgac
gtcgtggaggagcatgccagagaggactccaatggcgtccctgtgccagtcgacgtctcc
ggaccgaaccctaatgggtccgagttcgacaacttgtaccttgacatgaacggcattata
catccctgttttcatcccgatgggaagcctgcccccgctacctatgatgatgtattcaaa
tcaatatttgattacattgatcatctattcacattggttcgcccaagaaagcttcttttt
ttggcaattgatggggttgctccaagagccaaaatgaatcagcaacgttctcgacgttac
agagcttcaaaagatgcggctgaagcggaagctgaagaggaaagacttaagaaagaattt
gagatggaggggacatctttgccttctaaagagaaacctgaaactttagactcaaatgtc
ataaccccgggcactcaatttatggcagtgctctcggtggcacttcaatattacatacaa
agtaggttgaaccacaaccctggttggcggtctacgaaggttatactttctgatgcaaat
gttcctggcgagggagagcacaaaataatgtcatacatccgattgcaacgcagcctccct
ggttttgatcctaacactcgacattgtctttatggtttggatgcagatctaattatgctg
gctttagctacacatgaggttcacttctcaatattaagagaggtgattacttttccaggt
caacaagaaaaatgttttctttgtggacaagtgggtcatctggcagctgagtgtcgtggt
atatctgatgataatggaaacgtggttgatgatacaccaattcaccagaagaaatatcag
ttcctcaacatatgggtattgcgtgaatatttgcaatatgagctggatattcccaaccct
ccttttcagctcaattttgaaaggatagtggatgattttgtttttatgtgcttttttgtt
ggcaatgactttcttccacatatgccaacattggagatcagagagggtgctattaattta
ttgatgcatatttatagaacggagttcactgctatgggaggttatcttactgatgcgggt
gaggtattgctagacagagtagagcattttattcagtctgttgctgtttttgaaagccaa
atctttcaaaagcgggttcgaattcagcaggctattgagaataatgaagagagacataga
gctagaagagaaacttcagcagagctaccggctccggtgatggataaggttaaattggga
gagcctggatatacagaaaggtattatgctgagaaatttcaagtatcaacaccagaagag
attgataaagttaaaaaggacttggttttaaaatatgtagaaggcttatgttgggtttgc
cgatattattaccaaggagtctgctcatggatatggtattatccataccattatgctcct
tttgcttctgatctaaaagatttaaatgaactggaaataacatttttcttgggagagcca
tttaagcccttcgatcagctaatgggaaccctaccagctgcaagctctagtgctcttccg
gaaaaatacagaaacttaatgactgatccaagatcacctatccataatttctatcctgct
gattttgaaattgacatgaatggcaagcgctttgcatggcagggtgttgccaaattgccg
ttcattaacgagaggaaattggttactgagacaaggaagcttgaaagcactttaacggaa
gaagagcaggctcggaatagcgtgatgcttgatttgctttatgtttatccttctcatcct
ttggcagcacaaatcagtatgtactaccaacagttttatcagacacccctacatgaaaga
tttttatggcggatagacccaattgctagtggtggaatgaatggattccttgggttatct
gagagaaatggcttaagatatgtaatcccttcccctattcgtggttatcctgaccttgat
tgtaaccaagtcttaaatattacatatcttaatccggcagatcataaacacatcccagaa
cctcccaagggtgtgatcctgcccagaaaggttgtaagacctacggacatcaaaccattc
cctacgttatggcacgacgaaggtcctcgacgccaaggcagagagaggccacaaatacct
ggagcaattgctggacccatgttgggagaagcagctcaccgcctggtcaagaacaccctt
aatattaaacctaatggttcatcccctggattatgggatcaaccgccattacgaaattcc
ggaaattatgcaggaaattatccagtcaacagaccaaggccagctgggccctctgggtat
gaaagggtcttccgcgaagaagcaacgtatggaaattccttcaatcctcaggtcatgatg
gctaggcctagaattcctgcatcaaatggtatgcaaggtgacagacagaattttagggcg
caagaaagagtacaacatcaagaacagaattttaggacacaagatagagtacaagatcaa
gaacagtacaacctgagatccgtgatgtctagtttaacagtacaagacagtgggagaacc
aggtcacctgcagcggcgccacctgggatgccaaattcaggataccaagcaaaccgtaag
caccagtttgtgcagaacatgggtgctcttccttcgccacctaccaagtggattagcaaa
gaaccaactggaaatggtggattacatgtaaggaaacaggaaactggatatggtggagca
tgtgagcaacagcaggtcaagaaggtctatcaagttaagacgcgggctccccaggatgtc
aaaccgtag

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