KEGG T03194: 103435434

Malus domestica (apple): 103435434

Entry

103435434         CDS       T03194

Name

(RefSeq) isoleucine--tRNA ligase, cytoplasmic

K01870

isoleucyl-tRNA synthetase [EC:6.1.1.5]

Organism

mdm Malus domestica (apple)

Pathway

mdm00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103435434
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mdm01007]
    103435434
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103435434
Enzymes [BR:mdm01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     103435434
Amino acid related enzymes [BR:mdm01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   103435434
Transfer RNA biogenesis [BR:mdm03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    103435434
Prokaryotic type
   Other AARSs
    103435434

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e

Other DBs

NCBI-GeneID:

103435434

NCBI-ProteinID:

XP_028956723

LinkDB

Position

04:join(4011677..4012210,4012571..4012636,4012994..4013137,4013411..4013631,4013771..4013936,4014410..4014523,4014872..4014969,4015239..4015317,4015908..4016066,4016262..4016351,4016717..4016850,4017837..4017996,4018139..4018222,4018644..4018856,4019180..4019305,4019461..4019598,4020074..4020177,4020278..4020341,4021202..4021290,4021418..4021559,4021842..4021905,4021986..4022053,4022775..4022897,4023125..4023190,4023319..4023430,4023584..4023675,4023772..4023876)

AA seq 1184 aa
MEEVCEGKDFSFPKQEETILKLWSEIKAFETQLARTEGQPEYVFYDGPPFATGLPHYGHI
LAGTIKDVITRFFSMTGHHVIRRFGWDCHGLPVENEIDRMLGIKRRDDVLKMGIDKYNEA
CRSIVTRYVGEWEKVISRTGRWIDFNNDYKTMDLKFMESVWWVFGQLFEKGLVYKGFKVM
PYSTGCKTPLSNFEAGQEYRDVPDPEIMVTFPIVGDPQKANFVAWTTTPWTLPSNLALCV
NANFTYVKVRNKYSGKVYVVAESRLSALPNEKPKENVAHGSVGDSKKLNSKAKGSSGGKK
ETVDSSYEVLEKFSGSSLEGKKYEPLFDYFTEFSDVAFRVVVDNYVTNDSGTGIVHCAPA
FGEDDYRVCLENQVINKGENLIVAVDDDGCFTERITDFSKCYVKDADKDIIEAVKAKGRL
VKSGTVTHSYPFCWRSKTPLIYRAVPSWFIRVELLKEKLLENNKQTYWVPDFVKEKRFHN
WLENARDWAVSRSRFWGTPLPVWISEDGEEIVVMDSIQKLEELSGVKVFDLHRHNIDHIT
IPSSRGPEYGVLRRIDDVFDCWFESGSMPYAYIHYPFENVEHFEENFPGHFVAEGLDQTR
GWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVIDDYGADALRL
YLINSPVVRAEPLRFKKEGVFGVVKDVFLPWYNAYRFLVQNAKRLEVEGFSPFLPVDLAT
VQKSSNVLDQWINSATQSLVYFVQQEMNGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKG
RTGEEDCRMALSTLYNVLLVSCKVMAPLTPFFTEVLYQNMRKALNESEESIHFCSFPEGE
GKTDERIEQSVTRMMTTIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDIGGKLREYV
LEELNVRSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSQESILAFEKAG
EVTLSGHCLKLGDIKVVRDFKRPNGTTEKEIDATGDGDVLVILDLRPDESLFEAGIAREI
VNRIQKLRKKAALEPTDMMEAYFESLDQDKSVSQRVLHSQEQYIRDTIGLPLLLSSVMPS
DAVVVAEESFHGISGMSFVISLTRPVPVLDSDAILSLYSGNTEFARALQTYLLSRDHANL
KSEFQQGKGKINVDCIENTPAVELVLGDHVFLTVGDFISRTKSQ

NT seq 3555 nt +upstreamnt +downstreamnt
atggaggaggtgtgcgagggcaaggacttctccttccccaagcaagaggagactatcctc
aagctctggtctgaaatcaaggccttcgaaacccaattggcgcgcacagagggccagccc
gagtacgtcttctatgacggtcctccattcgccaccggactcccacactacggccacata
ctggccggcaccatcaaagacgtcatcacccgattcttctccatgacgggccaccacgtc
atccgccgcttcggctgggactgccacggtctgccggtggagaacgagatcgatcggatg
ctcgggatcaagcgtcgggacgatgtgctgaagatggggattgataagtacaatgaagcc
tgcaggagcattgttactcggtacgtgggggagtgggagaaggttatttcgcggacgggg
cggtggattgatttcaataacgattacaagacgatggatttgaagttcatggagagcgtt
tggtgggtctttggccagttatttgagaagggtcttgtttataaaggcttcaaggtcatg
ccatacagcactggttgcaagacaccgctttccaattttgaggctggtcaagagtacagg
gatgtacctgatcctgaaattatggtgacttttccaattgttggagatccgcaaaaggca
aattttgtagcttggacaactacaccatggaccctcccgagcaatttggccctttgtgtc
aatgcaaattttacttatgtgaaggtccgcaacaagtactctggaaaagtttatgttgtt
gctgaatctcggttgtcagctcttcctaatgagaaaccaaaggaaaatgtagcacatgga
tctgttggtgattcaaaaaagctaaattcaaaggccaaaggatcctcaggtgggaaaaag
gaaaccgtggacagttcatatgaagtattggagaaattctctggttcttcgttagaggga
aagaagtatgaaccgctgtttgactactttacggagttctctgatgtggcatttagagtt
gttgtggacaactatgttaccaatgacagtggtactggtattgtgcattgtgctcctgca
tttggtgaagatgattatcgtgtttgccttgaaaatcaagtaatcaacaagggagagaac
ttgattgtagctgttgatgatgatggatgctttaccgaaagaattaccgacttcagcaag
tgctatgtcaaggatgcagataaagatattattgaagcagtgaaggcaaaaggaaggcta
gtgaagtctggaacggttactcattcttatcccttttgctggagatctaaaactccgctt
atttacagagctgttccaagctggtttatccgagtggagctgttgaaagaaaaattgtta
gaaaacaacaagcagacttactgggttcctgattttgtcaaggaaaagcgctttcacaat
tggctggagaatgcaagagattgggctgttagtcgaagtagattttggggcactccactt
ccagtctggattagtgaggatggtgaagaaattgttgtaatggattctattcagaagctt
gaagagctttctggtgttaaggttttcgatctgcaccgccacaatattgatcacattact
attccctcaagccgaggtcccgaatatggtgttcttcgacgtatagatgatgtgtttgat
tgttggtttgagagtgggtccatgccttatgcttatatccactatccttttgagaatgtt
gaacattttgaggaaaatttccctggccattttgtggctgaggggctagatcagactcgt
ggatggttctacactcttatggtgttatctacggcgttatttgggaaacctgcttttagg
aacctcatttgcaatggacttgtccttgctgaggatgggaaaaaaatgagtaaaagtttg
aaaaattatccttcaccaatggaagttatcgatgactatggggccgatgcactaagacta
tacctcattaactctcctgttgtgcgtgcggagccgttacgtttcaagaaggaaggagtt
tttggtgttgtcaaggatgtatttcttccttggtacaatgcatatcggttccttgttcag
aatgcaaagagacttgaagttgaagggttttcccctttcctccctgttgatctagccact
gtacagaagtcgtctaatgtgcttgaccagtggatcaattcagccacacagagtcttgtt
tattttgttcagcaagagatgaatggttatcgactttatacggtggttccatatcttttg
aagtttcttgacaacttaacaaatatttatgtgcggttcaatcggaagaggctaaagggt
cgaactggtgaagaggattgcagaatggcactttcaactctctacaatgtcctcttggtg
tcatgtaaagtaatggcaccattaacaccattcttcacggaggtcctttatcaaaatatg
cggaaagctttgaatgagtcagaggaaagcattcatttttgcagttttcctgaaggagaa
ggaaagacagacgagcgtatagagcaaagtgttacaagaatgatgacaacaattgatctt
gcccgtaatattcgtgagcgtcacaacaagcctctcaaaacacccctgagggagatggtt
attgttcatcctgatgcagactttcttgatgatattggtggaaagctaagagagtatgta
ttggaggaacttaatgtaagatctcttgtcccatgtaatgatacactgaagtatgcttcg
ttacgagcagagcctgattttagcgtattaggtaagcgacttggaaaatctatgggagtt
gttgccaaagaagtcaaggccatgtctcaagaaagcattttagcatttgagaaagctgga
gaagttactctttctggtcattgtttaaagctgggtgatattaaggttgttagggatttc
aaacgtcctaatggaacgacagaaaaggagattgatgctacaggggacggtgatgttttg
gtgattttggatttacgtccagatgagtcattgtttgaggccggtattgctcgtgagatt
gtaaacagaattcagaagttacggaagaaagctgcccttgaacctactgacatgatggag
gcatactttgaatcgttggatcaagataaatcagtctcacaacgggttttgcactctcag
gaacaatacattagggataccattggtttgccattgcttctgtctagtgtgatgccatca
gatgctgtcgttgttgcggaggagagtttccatgggatatctggcatgtcatttgttatc
agtttgacccgacctgtgccagtgcttgactcagatgcaattctttctctatattcagga
aacacagaatttgcacgggctctgcaaacgtacttgttatcaagggatcatgcaaatttg
aagtccgagtttcaacaaggaaagggaaagataaatgttgattgcattgagaacactcct
gctgtggaactggtgttgggggatcatgtattcttgaccgtcggggacttcatttctaga
acaaaatctcagtag

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