KEGG   Malus domestica (apple): 103439121
Entry
103439121         CDS       T03194                                 
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
mdm04120  Ubiquitin mediated proteolysis
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103439121
   04120 Ubiquitin mediated proteolysis
    103439121
  09124 Replication and repair
   03420 Nucleotide excision repair
    103439121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103439121
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103439121
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103439121
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103439121
  Multi subunit type E3
   SCF complex
    Ring finger protein
     103439121
   Cul2 complex
     103439121
   Cul3 complex
     103439121
   Cul4 complex
     103439121
   Cul7 complex
     103439121
   Cul8 complex
     103439121
   Cul9 complex
     103439121
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103439121
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103439121
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 103439121
NCBI-ProteinID: XP_008375895
UniProt: A0A498JHP5
LinkDB
Position
07:join(17403853..17403985,17404096..17404146,17404245..17404304,17405145..17405216,17405325..17405362)
AA seq 117 aa
MATLDSDVPMIPAGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcaacactggactcagacgttccgatgattcctgcaggcgagggttcgagcagtgca
ggtccttcttcgaccaagaagcccaagcgattcgagatcaagaagtggaatgctgtagct
ctctgggcttgggatattgtggttgataactgtgccatttgcaggaatcatatcatggat
ctctgcattgagtgccaagcaaaccaggcaagtgccacaagcgaggagtgcacggttgct
tggggggtttgtaaccatgcattccacttccactgcataagccgatggctcaagactcga
caagtgtgcccattggataacagcgagtgggagtttcagaagtatggtcactag

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