KEGG   Malus domestica (apple): 103440149
Entry
103440149         CDS       T03194                                 
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103440149
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103440149
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103440149
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     103440149
SSDB
Motif
Pfam: HATPase_c_3 SMCHD1_S5 HATPase_c
Other DBs
NCBI-GeneID: 103440149
NCBI-ProteinID: XP_070681623
LinkDB
Position
07:join(35167285..35167617,35167777..35167812,35167956..35168042,35168135..35168190,35168512..35168595,35169017..35169089,35169282..35169337,35169445..35169550,35169676..35169744,35170011..35170094,35170244..35170303,35170804..35170936,35171113..35171174,35171298..35171426,35171995..35172085,35172201..35172235,35179464..35179539,35179633..35179815,35180032..35180190,35180428..35180449,35180558..35180672,35180800..35180916,35181007..35181321,35181433..35181573,35181726..35181875,35182110..35182223,35182342..35182443,35182635..35182749,35182948..35183149,35183243..35183434,35183578..35183898,35184005..35184233)
AA seq 1348 aa
MQRTPTKRSQVREDHGNKDVTYRFKVLLPNGMSVGLQLQNPEHKMPLGDFIQMLKREHHL
ALRESSSRKRKREIDWNAGGLFIEDANNREIRDVVNFKNFKAHECHILKLHDGNVSERVI
TFENMWDLTPVTDLLRELPQEYTSETALADLIDNSLQAVWANDRRHKKLISVDVADNVIS
IFDTGPGMDGSDKNSIVKWGKMGASLHRSFKDQAIGGTPPYLTPFFGMFGYGGPIASMQL
GRHALISSKTKDSRKVYTLHLDREALLSRSNSDSNWKTAGGMRDPLEEEMIRTPHGSFTK
VEIYKPKSKLDIDQLRCKLKDIYFPYIQCDEESKAGKIWKTVTPVNFEVNGVDLAEIAGG
EIATTNLHSSNGPDFVLQLHFFCKKNSMSQSPDSKTDIKANARLKCVYFPVVKGKENIER
ILESLESEGCSTSEKFETYSRVSIRRLGRLLPDARWALLPFMEFKQKKGDRAHLLKRCCL
RVKCFIETDAGFNPTPSKNDLAHHGPFTAALRNFGNQPLENENDIKIQISRDGKHLNLAQ
LKREYENWILQMHEQYDDEADCGEDQPVVVVSPINKKALHMSSEVARVHKSLKRKGIAWK
RGQKIKLLKGACAGVHKNNVYATIEYFLLEGLEGDSGGQAQMFCRPLSNPDAKGCILSIS
DGDTSLDVGGSLPVPVSVIDTGMCVAVGSTEWDNQLEKQRQKSPSTIDLLDAEQCQELDI
NGALPVDAQAGKDPPEAIVAIVRPASYDSSCNSKTLDQKHIAKTNLQMSMKVKFSSDAEG
LQRVHDISVSVAPKSLKGFQGLYIFPLKSKYPDLFQNAGIYTFSFHLDESDCKAIEKKVL
IKEARKVEYKQIHSTFPKEKVSRPQDSSDSPNLQDESNGKSVEKKVLIKEARKVEYKQIQ
STSPKENVLGSQYSSHSPKVEKLQVLVKRAKVEYNESQVPLSPGKVLPLQDYSSLQKGGN
FQVSEMQVPKVEYEELSPFPLLLQDPSSLQQVENLQKKENDIKRIGLHIGDLEKRLVELN
ENKEILELEIAHLQACYQLSSSDYSSKKEELRNHIERMSHTAASTVSTLSRVPLQGPDND
FMGGMIGLVALLGRVRNFKLSRILSEYLGEDQMLAVVCKSFTAACALEKYHRSGEVDSRH
ALYAEAAKLERSIDSRFLVICLEDLRPYTGDFDGTDPQRKLFLPDPVLPSGDTPSGFLGY
AVNLVDLDDEHLHTVTTEGHNLRQTLFYSLFGELHVYRTRKQMFNARACIKQAAVSLDGG
ILKQTGMVSLGYGNPKICFPILVNVAEVLEEIAVNEEAKSEVVAAMEEIAKDREKVLTKL
RKKLKKQQKLITKTGEEFQKKMSAVDYS
NT seq 4047 nt   +upstreamnt  +downstreamnt
atgcagcggacaccaacaaagaggagccaagtgcgcgaagatcacggcaataaggacgtg
acgtatagattcaaggtgctgttgccaaatggcatgagtgttgggttgcaattgcaaaac
cctgagcacaaaatgccacttggagatttcattcagatgctgaaaagggagcatcacctg
gccttgagagaatctagctcgaggaagcggaagcgggagattgattggaatgctggcggt
ttatttattgaagatgccaataaccgggagataagggatgtggtgaatttcaagaacttc
aaggcacatgagtgccacattctgaagcttcatgatggtaatgtgtctgagagagttatt
acttttgagaatatgtgggatttgacacctgttactgatctactaagggaattaccgcaa
gagtacacgtctgagactgctctggcggatctgattgataattcccttcaagctgtttgg
gcaaatgacaggagacataagaagcttataagtgtggatgtggctgataatgtgatctca
atttttgacactggccctgggatggatggaagcgataaaaattctatagtgaagtgggga
aagatgggtgcttcacttcatagatcttttaaggaccaggcgatagggggcacacctccg
tacttaacgccattttttggaatgtttggatatggtggacctatagcgtctatgcaatta
gggaggcatgcattaatttcttccaagacaaaggattccaggaaagtttatacattacat
cttgatagagaggctttactgagcaggtcaaactctgattctaattggaagactgctggt
ggcatgagggatcctttagaagaagaaatgatcagaacaccacacggtagctttacaaag
gttgaaatttataaaccaaaatcgaaattggacatagatcaactccgatgcaagctgaag
gacatatatttcccgtatattcagtgtgatgaagaatccaaagcagggaagatttggaag
accgtaacaccagtaaactttgaggttaatggtgttgatttagctgagattgcaggtggg
gagattgcaacaactaacttgcattcatccaatggtcctgattttgttttacagcttcat
ttcttctgtaagaaaaacagtatgtctcaatctccagattcaaagacagatattaaagct
aatgctcgccttaagtgtgtctattttcctgttgttaagggaaaagagaatattgagaga
attttggagagtttagaatctgagggatgcagcacctcagaaaaatttgaaacctatagt
cgtgtctctattcggaggcttggtcgcctacttccagatgctcgttgggctttgcttcct
ttcatggaattcaagcaaaaaaaaggagacagggcacacttgttgaaaagatgttgtttg
agagttaaatgctttatcgagactgatgctggtttcaatccaacaccatctaagaatgat
cttgcacaccatggtccttttaccgctgcactgaggaacttcggtaatcagcctctggag
aatgaaaatgatatcaaaattcaaatttctagagatggaaagcatttaaatcttgctcaa
ctaaaaagggagtatgagaattggattcttcaaatgcatgagcagtatgatgatgaagct
gactgtggtgaagatcaaccagtggttgttgtcagtcctataaacaaaaaggcacttcat
atgtcatctgaagttgcaagggtgcataaatctctaaagaggaaaggaatagcctggaaa
cgtggccagaaaatcaaacttcttaagggagcatgtgctggggtccataagaacaatgtc
tatgctacgattgaatattttttgcttgaaggtctcgaaggtgactctggtggtcaggct
caaatgttctgcaggcctttaagtaatccagatgcgaagggatgcatcctttccataagt
gatggggataccagtttagatgttggtggctccttgcctgtacctgtcagtgtcattgat
actggaatgtgtgtagctgttggaagtaccgagtgggataaccaacttgagaaacaacgt
cagaaatctccttctacaattgatttgctggatgcagaacaatgtcaagagttggacatt
aatggggcactgcctgtagatgcccaagctggaaaagatcctccagaagcaattgtggcc
attgttcgtcctgccagttatgactcttcttgtaattccaagaccctggaccagaagcat
attgccaaaactaatttacaaatgtccatgaaagttaagtttagcagtgatgctgagggt
cttcaaagagttcacgacatttcagtgtccgtagcacccaagtcactaaaaggatttcaa
gggttatacatctttccacttaaatcaaagtacccagatttatttcaaaatgctggtatc
tatacattttcattccatcttgatgagtcagattgtaaggctattgagaaaaaagtgctt
atcaaggaagctcgaaaagtggagtacaaacaaattcactcgactttcccaaaggaaaag
gtttcacggccccaagattcatctgactctcccaacttacaggatgagtcaaatggcaag
agtgttgagaaaaaagtacttatcaaggaagctcgaaaagtggagtataaacaaattcaa
tcgacttccccaaaggaaaatgttttgggatcccaatattcatctcacagtcccaaagta
gaaaagttacaggttcttgtaaaaagagcaaaagtggagtacaatgagagtcaggttccg
ttgtcacctggcaaggttttgcctcttcaagattactcttccctccagaaaggaggaaac
tttcaggtttcagaaatgcaagttccaaaagtggagtacgaagaactatccccatttcct
ttgcttctccaagatccatcttcccttcagcaagtagaaaaccttcagaaaaaggagaat
gacattaaacgaattggattgcacattggagatctggaaaagcgattggttgagcttaat
gagaacaaggaaattcttgagctagaaatagctcatttgcaagcttgttatcaactgagc
agttcagattactcatcaaagaaagaagagctgagaaaccacatagagagaatgagccac
acggcagcttctactgtctccaccctttcaagagttccactccaagggccagacaacgat
ttcatgggaggcatgatcggtttagttgctctgctgggcagagttcggaactttaagctc
agcaggatattatctgagtacttgggtgaagatcagatgctcgctgttgtctgtaaatca
ttcacagctgcttgtgctctcgagaagtatcaccgcagtggggaagttgattctaggcat
gctctttatgcagaagctgctaaacttgagagatccatagatagccggtttcttgttata
tgcctcgaagatctacggccttacacaggtgactttgatggtactgaccctcaaaggaag
ctgttcttgccagatcctgtactgccaagtggagataccccgtctggtttcttggggtat
gcagttaatctggttgacctagatgacgagcatttacacaccgtgacaactgaaggccat
aatctgcggcagacattgttttattctcttttcggcgagctccatgtctacagaactagg
aaacaaatgttcaatgctcgtgcttgtatcaaacaagctgctgtatctttggatggcggg
attttaaaacaaaccgggatggtttctcttggatacgggaatccaaaaatctgtttcccg
attttggtgaatgtcgcggaagtcctggaggaaattgcagtaaacgaggaagcaaagagt
gaggtcgttgctgccatggaggaaattgccaaggaccgcgagaaagtgttgacgaagctc
agaaagaaattgaagaagcaacagaagctgataacaaagaccggggaggagtttcaaaag
aaaatgagtgcggtagactacagttga

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