KEGG   Malus domestica (apple): 103450248
Entry
103450248         CDS       T03194                                 
Name
(RefSeq) RING-box protein 1A-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
mdm04120  Ubiquitin mediated proteolysis
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103450248
   04120 Ubiquitin mediated proteolysis
    103450248
  09124 Replication and repair
   03420 Nucleotide excision repair
    103450248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103450248
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103450248
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     103450248
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   103450248
  Multi subunit type E3
   SCF complex
    Ring finger protein
     103450248
   Cul2 complex
     103450248
   Cul3 complex
     103450248
   Cul4 complex
     103450248
   Cul7 complex
     103450248
   Cul8 complex
     103450248
   Cul9 complex
     103450248
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103450248
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103450248
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 103450248
NCBI-ProteinID: XP_028955038
LinkDB
Position
02:complement(join(18530146..18530183,18530290..18530361,18530549..18530608,18530697..18530747,18530859..18530988))
AA seq 116 aa
MATLDSDVPMVPVGEGSSSAGSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggccacattggattctgatgtcccgatggttccggtaggtgagggttcgagcagtgca
ggttcttcgaccaagaagcccaagcggtttgagatcaagaagtggaatgctgtcgctcta
tgggcctgggatattgttgttgataactgtgccatttgcaggaaccatatcatggatctc
tgcattgagtgccaagcaaaccaggcaagcgcgacgagtgaagaatgtacagttgcttgg
ggggtttgcaaccatgcatttcacttccactgcataagccgatggctcaagacacgccaa
gtgtgtccgttagataatagcgagtgggaatttcagaaatatggtcattag

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