KEGG   Malus domestica (apple): 103451007
Entry
103451007         CDS       T03194                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    103451007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103451007
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     103451007
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 103451007
NCBI-ProteinID: XP_008388648
LinkDB
Position
12:join(29800611..29800817,29801391..29801493,29801595..29801671,29801757..29801948,29802130..29802249,29802443..29802505,29802588..29802725,29802824..29802988,29803460..29803537,29804297..29804383,29805099..29805176,29805468..29805563,29806137..29806207,29806388..29806516,29806628..29806704,29806794..29806834,29806955..29807029,29807751..29807902,29807996..29808100,29808184..29808259,29809400..29809476,29809632..29810352)
AA seq 975 aa
MGVPAFYRWLADRYPQSIADVVEEHPREDYNGVPLPVDVSRPNPNGYEFDNLYLDMNNII
HPCFHPDGKPPPATYNDVFKSVFDYIDHLFTLVRPRKLLFLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLKKEFEMGGAYLVPKEKPETSDSNVITPGTQFMAVLSVALQYYIQ
SRLNHNPGWQSTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITFPGQQEKCFLCGQVGHLAAECRGVPDDNGNVVDETPIHQKKYQ
FLNVWVLREYLQYELDIPNPPFPLNFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINL
LMHIYRKEFTAMGGYLTDAGEVLLDRVEHFIQSVAVFEQQIFQKRVRIQQAIENNEERHR
ARRETSAELPVPVIDKVKLGEPGYTERYYAEKFQVSKPEEIDKVKKDLVLKYVEGLCWVC
RYYYQGVCSWQWYYPYHYAPFASDLKDLDELEITFFLGEPFKPFDQLMGTLPAASSSALP
EKYRNLMSDPRSPIHDFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLESTLTE
EEQARNSIMLDLLYVCTSHPLAAHIIPYYQLCYQTPPHERCLWIIDTIASGGMNGFLWLS
ERNGVRHVIPSPVHGYPNLHYNQVLNVTYFYPTAHTHIPEPPEGVIMPRKVVRPTDIKPF
PTLWHDEGPRRQGRERPQIPGAIAGSMLGEAAHRLVKNTLNIRPSSSSSGFWDQPTLRNS
GNYAGNYPVNRPRSSGPSGYESGFREEAKYGNSFNPQVMMIRPRFLASNGMQGGRQNFRA
QERVQYQEQSFRTQEGVQYQEQYHNLRTAMSSLTVQGSVRTRSPAAAPPGMPNSGYQANH
QHQFVQNMGALPSPPTKWISKEPTGNGGLFVRQQETGYGGAYEQPQVKVYQVKTRAPQDT
SDRGDQSGSDSSGFV
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgggcgtccctgcgttttaccgctggctagcggatcggtacccgcagtccatcgccgac
gtcgtggaggagcatcctagagaggactacaatggcgtcccattgccagtcgacgtctcc
agaccaaatcctaacggatatgagttcgacaacttgtaccttgacatgaacaacattata
catccatgctttcatccggacggcaagcctccccccgcaacctataatgatgtattcaaa
tcagtatttgattacattgatcatctgttcacattggttcgcccaagaaagcttcttttt
ttggcaattgatggggttgctccaagagctaaaatgaatcagcaacgttctcgacgtttc
cgagctgcaaaagatgcggctgaagcagaagctgaagaggaaagactgaagaaagaattt
gagatgggaggggcatatttggttcctaaagagaaacctgaaacttcagactcaaatgtt
ataaccccaggcactcaatttatggcagtgctctcggtggcacttcaatattacatacaa
agcaggttgaaccacaaccctggttggcagtctacgaaggttatactttctgattcgaat
gttcctggcgagggagagcacaaaataatgtcatacatccggttgcaacgcaacctccct
ggttttgaccctaacactcgacattgtctttatggtttggatgcagatctgattatgctg
gctttagctacacacgaggttcacttctcaatattaagagaggtgattacttttccaggt
caacaagaaaaatgttttctttgtggacaagttggtcatctggcagctgagtgtcgtggt
gtacctgatgataatggaaatgtggttgatgaaacaccaattcaccagaaaaaatatcag
ttcctcaatgtatgggtattgcgtgaatatttgcaatatgagctggatattcccaaccct
ccttttccgctcaattttgaaaggatagtggatgattttgtttttatgtgtttttttgtt
ggcaatgactttcttccacatatgccaacattggagatcagagagggtgctattaattta
ttgatgcatatttatagaaaggagtttactgctatgggaggttatcttactgatgcgggt
gaggtattgttagacagagtggagcattttattcagtctgttgctgtttttgaacaacaa
atttttcaaaagcgggttcgaattcagcaggctattgagaataatgaagagagacataga
gctagaagagaaacttcagcagagctaccggttccggtgatagacaaggttaaattggga
gagcctggatacacagaaaggtattatgctgagaaatttcaagtatcaaaaccagaggag
attgataaagtcaaaaaggacttggttttaaaatatgtagaaggcttatgttgggtttgc
cgatattattaccaaggagtctgctcatggcaatggtattatccataccattatgctcct
tttgcttctgatctgaaagatttagatgaattggaaataacatttttcttgggagagcca
tttaagcccttcgatcagctcatgggaaccttaccagccgcaagctccagtgctcttccg
gaaaaatacagaaacttgatgagtgatccaagatctcctatccatgatttctaccctgct
gattttgaaattgacatgaatggcaagcgctttgcatggcagggcgttgccaaattgcca
ttcattgatgagaagaaattgcttacggagacaaggaagcttgaaagcactttaacggag
gaagagcaggctcggaatagcataatgcttgatttgctttatgtttgtacttctcatcct
ttggcagcacacatcattccgtactaccaactgtgttatcagacacccccacatgaaaga
tgtttatggatcatagacacaattgctagtggtggaatgaatggattcctttggttatct
gagagaaatggcgttagacatgtaatcccttcccctgttcatggttatccaaaccttcat
tataaccaagtcttaaatgttacctatttttaccccacagctcatacacacattccagaa
cctcccgagggtgtgataatgcccagaaaggttgtaagacctacggacatcaaaccattc
cctacgttatggcacgacgaaggtcctcgacgccaaggtagagagaggccacaaatacct
ggagcaattgctggatccatgttgggagaagcagctcatcgactagtcaagaacaccctt
aatattagacctagtagttcatcctccggattttgggatcaaccgacattacgaaattct
ggaaactatgcaggaaattatccagtcaaccgaccaagatcatctgggccctctgggtat
gagagtggcttccgcgaagaagcaaagtacggaaattccttcaatcctcaggtcatgatg
attaggcctagatttctcgcatcaaatggtatgcaaggtggcagacagaattttagggca
caagaaagagtacaatatcaagaacagagttttaggacacaagagggagtacaatatcaa
gaacagtaccacaacctgagaaccgcgatgtctagtttaacagttcaaggcagtgtgaga
accaggtcacctgcagcggcgccacctgggatgccaaattcaggataccaagcaaaccat
cagcaccagtttgtgcagaacatgggtgcccttccttcgccacctaccaagtggattagc
aaagaaccaactggaaatggtggattatttgtaaggcaacaggaaactggatatggtgga
gcatatgagcaaccgcaggtcaaggtctatcaagttaagacgcgtgctccccaggatacg
tcagaccgtggagaccagagcgggagtgattcctcaggatttgtgtga

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