KEGG   PATHWAY: mdt03050
Entry
mdt03050                    Pathway                                
Name
Proteasome - Myotis daubentonii (Daubenton's bat)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mdt03050  Proteasome
mdt03050

Other DBs
GO: 0000502
Organism
Myotis daubentonii (Daubenton's bat) [GN:mdt]
Gene
132211154  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
132211293  [KO:K02739] [EC:3.4.25.1]
132211901  [KO:K11599]
132212372  PSMB7; proteasome subunit beta type-7 isoform X1 [KO:K02739] [EC:3.4.25.1]
132213345  [KO:K02725] [EC:3.4.25.1]
132213366  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
132215230  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
132216893  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
132216938  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
132217407  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 isoform X1 [KO:K03038]
132217447  PSMB10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
132218135  PSMB6; proteasome subunit beta type-6 isoform X1 [KO:K02738] [EC:3.4.25.1]
132218367  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
132218574  PSMC5; 26S proteasome regulatory subunit 8 isoform X1 [KO:K03066]
132218597  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
132218679  PSME3; proteasome activator complex subunit 3 isoform X1 [KO:K06698]
132218926  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
132218957  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
132220584  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
132221299  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
132221362  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
132222285  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
132222782  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
132224048  [KO:K06691]
132226175  IFNG; interferon gamma [KO:K04687]
132228138  POMP; proteasome maturation protein isoform X1 [KO:K11599]
132228789  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
132230050  [KO:K02726] [EC:3.4.25.1]
132230172  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
132230582  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
132230628  [KO:K02739] [EC:3.4.25.1]
132231324  PSMB2; proteasome subunit beta type-2 isoform X1 [KO:K02734] [EC:3.4.25.1]
132233793  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
132234651  PSMC6; 26S proteasome regulatory subunit 10B isoform X1 [KO:K03064]
132236685  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
132237493  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
132237494  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
132238339  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
132238599  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
132239102  PSMA8; proteasome subunit alpha-type 8 isoform X1 [KO:K02731] [EC:3.4.25.1]
132239168  ADRM1; proteasomal ubiquitin receptor ADRM1 isoform X1 [KO:K06691]
132239173  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
132239460  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
132240515  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
132240696  [KO:K03062]
132240860  PSME1; proteasome activator complex subunit 1 [KO:K06696]
132240866  PSME2; proteasome activator complex subunit 2 [KO:K06697]
132241002  PSMA1; proteasome subunit alpha type-1 isoform X1 [KO:K02725] [EC:3.4.25.1]
132241194  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
132241593  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
132241739  PSMA6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
132242967  SEM1; 26S proteasome complex subunit SEM1 isoform X1 [KO:K10881]
132243129  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mdt04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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