Massilia endophytica: LSQ66_06140
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Entry
LSQ66_06140 CDS
T09693
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
meny
Massilia endophytica
Pathway
meny01501
beta-Lactam resistance
meny01503
Cationic antimicrobial peptide (CAMP) resistance
meny02020
Two-component system
meny03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LSQ66_06140
09132 Signal transduction
02020 Two-component system
LSQ66_06140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSQ66_06140
01503 Cationic antimicrobial peptide (CAMP) resistance
LSQ66_06140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_06140
02044 Secretion system [BR:
meny02044
]
LSQ66_06140
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_06140
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_06140
Secretion system [BR:
meny02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LSQ66_06140
RTX toxin transporter
LSQ66_06140
Multiple protein transporter
LSQ66_06140
RaxAB-RaxC type I secretion system protein
LSQ66_06140
Antimicrobial resistance genes [BR:
meny01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LSQ66_06140
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LSQ66_06140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Rubi_NSP_C
Motif
Other DBs
NCBI-ProteinID:
UGQ48045
LinkDB
All DBs
Position
complement(1331541..1333043)
Genome browser
AA seq
500 aa
AA seq
DB search
MQRSLFTLLLAASPALWAQDLLLRDAVALALARSPDISLQRSTQQAAEGVARSSNAPFDL
VQTAALGGTRDERPLRADERARYLSAGPDQLIDGSTTSLGASRQFANGLQLSGLYAVTRA
DDNVQGAQNIPRQTSDRLTFTLRVPLQKNPGKDAAAARNAATLDAAAAARETEQAVARTV
LAVVQAYWDWAARQSAADVAAAAETRTRQLRRETEKLVEADELPPADLNLLTAAVTEREA
ARIGAEQRARDGRFALARLYGMDAGETAALAPPAQRLPEHAGSDSMAALGAQALQRRADV
AALRLREEAMDTRLKAARNSDKPALDLDVSAYYAGLREGARTAAAAFDPTSRHSGPGIAA
KLSLQWPVQNSANSGALQVAAANADSARLRRVTLEQSVTASMESAYQAYNAYAAQLRASE
LTIARYRAALQDTSTRRQLGSATLIDVLNVEDRLNNALLARLQFQQGYATARAQILYETG
RLLRTGPDGTLSVALDELLP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcagcctcttcaccctcctgctggccgcatcgcccgcgctgtgggcgcaggac
ctgctcctgcgcgacgccgtggccctggccctggcgcgcagcccggatatcagccttcag
cgctccacccagcaggctgccgaaggcgtggcgcgcagcagcaatgcgcccttcgacctc
gtgcagacggccgcactgggcggcacgcgtgacgaacgtcccctgcgtgccgatgagcgg
gcccgctacctgagcgcgggtccggaccagctgatcgacggctccaccacttcgctgggc
gcctcgcgccagttcgccaacggcctgcagctgagcgggctctatgcggtcacgcgcgcg
gacgacaacgtgcagggcgcccagaacattccgcgccagaccagcgaccgcctgactttc
acgctgcgcgttccgctgcagaagaatcccggcaaggacgcagccgccgcacgcaatgcc
gcaacgctggatgccgccgctgccgcgcgtgaaaccgagcaggccgtggcgcgcacggta
ctggccgtggtgcaggcttactgggactgggctgcgcggcagtccgccgccgatgtggcg
gcggcggccgagacgcgtacccgccagctgcggcgcgaaacggaaaagctggtggaggcg
gacgaactgccgcccgcggacctgaacctgctgaccgcggcggtgaccgagcgcgaagcg
gcccgcatcggcgccgaacagcgcgcccgcgacggacgcttcgccctcgcccgcctctac
ggcatggacgcgggcgaaacggcggctcttgcgccgccggcccagcgcctgcccgaacat
gcgggcagcgacagcatggcggcactgggcgcgcaggccctccagcgccgtgccgatgtt
gcggcgctgcgcctgcgcgaggaagccatggacacccgcctgaaggccgcccgcaacagc
gacaagccggccctggacctcgatgtctccgcctactacgcgggcctgcgcgaaggcgcc
cgcacggcggcagcagccttcgaccccacctcccgccacagcggtccgggcattgcagcc
aagctttcgctgcaatggccggtgcagaactccgccaacagcggcgccctccaggttgcg
gcagccaatgcggacagcgcccgcctgcgccgcgtcacgctggagcagtcggtcacggca
agcatggaatctgcctaccaggcctataacgcctacgccgcccagctgcgggcatccgag
ctcaccatcgcccgctaccgcgccgcccttcaggacacgagcacccgccgccagcttggc
agcgccacgctgatcgatgtgctgaatgtggaggaccgcctgaacaacgcgctgctcgcc
cgcctgcagttccagcagggctacgccacggcgcgggcccagatcctttacgaaaccggc
cgccttctgcgcacaggcccggatggaacgctgagtgtcgcgctggacgagctgctccct
taa
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