Methylophaga marina: GCM100_06470
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Entry
GCM100_06470 CDS
T09183
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
mmaf
Methylophaga marina
Pathway
mmaf01501
beta-Lactam resistance
mmaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM100_06470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GCM100_06470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmaf02000
]
GCM100_06470
01504 Antimicrobial resistance genes [BR:
mmaf01504
]
GCM100_06470
Transporters [BR:
mmaf02000
]
Other transporters
Pores ion channels [TC:
1
]
GCM100_06470
Antimicrobial resistance genes [BR:
mmaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GCM100_06470
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GCM100_06470
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GCM100_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BDZ72928
LinkDB
All DBs
Position
661358..662647
Genome browser
AA seq
429 aa
AA seq
DB search
MSASPDYQTKIQQEQTLPAWSQSDEAESVISLNSLIASAQLNQLVETAIQHNPTLQQTWL
TLRIRQTQLQQTDAARQPQISAAAGATRSENADDNFTSRIDISWQADLWGKLKANSQAAT
QDVNEQALLYQAARDSLSAEVMKAWLNLTATSHAITIEKQRLKTLEQNERYIVQRYRNGI
GTLEDLDNARSSSAQSRASLAAFQEDYRQQQRDLKTLLGQTNTADIEAPASYPEVKLAWA
DVPEQTLARRPDLQAAYIAIEADQLRTEVAYKELLPSLDIGAALEDAASSPHQALMGSPL
WSLLAQLTAPIYQGGQLRAAAKEAELNEAYSYQRYRETLLTAVNEVEQYLSLEQNLLTRQ
QHIADALKSAQNSLEQYQTSYRTGLVDILDLLTVQQQTYNLEATLDNLIYQRLINRINLG
LALGLRTTP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagccctgattaccaaacaaagatacaacaagagcaaactctgcccgcctgg
tcacaatctgatgaggctgagtccgttatatcattgaacagcctgattgcttcagcgcaa
cttaatcagttggtagaaacagctatccaacataaccccaccctgcaacaaacctggtta
acactgcgaattcgtcagacgcaattgcagcaaaccgatgcagctcgtcaaccacaaatc
agtgctgcagcaggcgcaactcgcagcgagaacgctgatgataattttaccagtcgtatc
gatatcagctggcaagctgatttatggggtaagttaaaagccaatagccaggcagccact
caggacgtgaacgagcaagccctgctctatcaagcagctcgtgatagtttaagtgcggag
gtcatgaaagcctggctaaacctcaccgcaacctcacacgccatcaccatagaaaagcag
cgtttgaaaaccctggaacagaatgaacgctacatcgtgcaacgttacagaaacggtatt
ggcacattggaagatttagataatgcccgtagctccagtgcccaatcaagagccagcctt
gctgcctttcaggaagattatcgtcagcaacaacgagacttaaagacattattaggacag
accaacactgcggatattgaggcgccagccagctatccagaagtcaaactggcctgggct
gatgtacccgaacagactttggcacgtcgccccgacttacaagcggcctacatcgctatt
gaagcagaccagctacgcactgaagtggcctataaagaacttttaccaagcctggacatt
ggtgccgctcttgaagatgcggcctcatcacctcatcaggcattaatggggtcaccactc
tggtcattactcgctcagctgacagcgcctatttaccaaggtgggcaattacgtgcagca
gctaaggaagccgaattaaatgaggcctatagctatcagcgttatcgtgaaaccttatta
acagccgttaatgaagtcgagcaatatcttagtctggagcaaaatctgttaacccgccag
cagcacattgcggatgcattaaaaagtgcacaaaacagcttagagcagtatcagacaagt
tatcgaacggggttggtcgatattctggatttactgactgtacagcaacaaacttacaat
ctggaagccactctggataaccttatttatcaacgcctgattaaccggattaatcttggc
ttagcactcggcctgagaaccacaccatga
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