Methylophaga pinxianii: LGT42_004325
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Entry
LGT42_004325 CDS
T08312
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
mpin
Methylophaga pinxianii
Pathway
mpin01501
beta-Lactam resistance
mpin01503
Cationic antimicrobial peptide (CAMP) resistance
mpin02020
Two-component system
mpin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LGT42_004325
09132 Signal transduction
02020 Two-component system
LGT42_004325
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGT42_004325
01503 Cationic antimicrobial peptide (CAMP) resistance
LGT42_004325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpin02000
]
LGT42_004325
02044 Secretion system [BR:
mpin02044
]
LGT42_004325
01504 Antimicrobial resistance genes [BR:
mpin01504
]
LGT42_004325
Transporters [BR:
mpin02000
]
Other transporters
Pores ion channels [TC:
1
]
LGT42_004325
Secretion system [BR:
mpin02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LGT42_004325
RTX toxin transporter
LGT42_004325
Multiple protein transporter
LGT42_004325
RaxAB-RaxC type I secretion system protein
LGT42_004325
Antimicrobial resistance genes [BR:
mpin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LGT42_004325
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LGT42_004325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SPATA24
YjbR
Motif
Other DBs
NCBI-ProteinID:
UPH46515
LinkDB
All DBs
Position
900409..901731
Genome browser
AA seq
440 aa
AA seq
DB search
MKALFIVGFITTLFYRPAVAAQDLVDIYNMSAQSDPILMAQAASLRATGELAEQADAAFL
PQVDMVANNSKVWTESSSQRFGGTSEYNDHGYTLSLVQPIYRRNNFVQSRQADIAIEGAE
ANYQFAEQDLIVRVAERYFAVLGAEDDLSFALAELEAIEKQLEQAEQRFEVGLATITDVS
EARAAYDLANAAVIEAENLLANSREALRETAGEYPGELAELKDETPLVKPEPESIDEWSE
QAIVMNPVLLAASSNVGLAKENIEFERSGHYPTLDLVAQKGYTSQSDSNLSGSNKTHQKI
LGLQVNIPIYAGGVVSSRTREASFRLDEAMQNEEEQRRAIMRQTRAAYNSVMSGISRVKA
LQQAVYSNQKALESTEAGFDVGTRTTVDVLNARRELFSALRDYSRSRYDYVVNTLRLKQA
AGIVSVDDIVLINQWLEPRA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccctgtttatcgttggtttcataacgacactgttttaccggccggctgttgcg
gcacaggatttggtagacatttataatatgtccgctcaaagtgatccgattctgatggct
caagcagcatcgttgcgggcaaccggtgaattagcagagcaagctgatgccgcatttctg
ccgcaagtcgatatggtggcgaataatagtaaagtatggacagaaagctcttctcaacgc
tttggtggcaccagcgaatacaacgatcacggatacacattaagtctggttcaaccgatt
taccgccggaataactttgtgcaatcacgtcaggctgatattgccatcgaaggcgctgaa
gcaaattatcaatttgccgaacaggatttaattgttcgtgtggcagagcgttattttgca
gtgcttggtgccgaagatgatttgagttttgcattggctgaacttgaagcaatcgaaaaa
cagcttgaacaggctgagcagcgatttgaagtggggcttgccacgattacagatgtcagt
gaagcacgtgcggcatatgatttggcaaatgctgcggtgattgaagcggaaaacttgttg
gccaacagtcgtgaagcactacgtgaaacagctggtgaatatcctggggaattagccgag
cttaaagatgaaacgccactggtcaagcctgaaccggaaagtattgatgagtggagtgaa
caggccattgttatgaacccagtactccttgcagccagcagtaatgtgggactggcaaaa
gaaaatattgagtttgagcgcagtggtcattatccgaccctggatttagtggcacagaaa
ggctatacctcgcaaagtgacagtaatttaagtggaagcaataagacgcatcagaaaata
ttaggtttacaggttaatattccaatctatgcgggcggtgtcgtcagttcaagaacccgt
gaagccagtttcaggctcgatgaagccatgcaaaatgaagaagaacagcgacgcgctatt
atgcgtcagacacgggcggcctataacagtgtgatgtcaggtatcagtcgggtaaaagct
ttgcaacaggcggtgtattccaatcaaaaagcattggaatcaacggaagcgggctttgat
gtagggactcgcacaaccgttgatgtgttaaatgcacgccgtgaattattcagtgcatta
cgggattattctcgttcgcgttatgattatgtggtcaatacattaaggctgaaacaagcc
gctggtattgtgagtgtggacgatattgtactaatcaatcagtggttggaacctcgggct
taa
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