Methylophaga pinxianii: LGT42_011895
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Entry
LGT42_011895 CDS
T08312
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
mpin
Methylophaga pinxianii
Pathway
mpin01501
beta-Lactam resistance
mpin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGT42_011895
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGT42_011895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpin02000
]
LGT42_011895
01504 Antimicrobial resistance genes [BR:
mpin01504
]
LGT42_011895
Transporters [BR:
mpin02000
]
Other transporters
Pores ion channels [TC:
1
]
LGT42_011895
Antimicrobial resistance genes [BR:
mpin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LGT42_011895
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LGT42_011895
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LGT42_011895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UPH45205
LinkDB
All DBs
Position
2492460..2493830
Genome browser
AA seq
456 aa
AA seq
DB search
MNVTKPDRSLKTLTILPLLLLTACSMTPEQPDYDRLITAEQQQVPEWQTLSQQTNVAYLN
DLVDSDMFEDLLQIAMQSNPGLQQTLLTLQIRQSQLVQAAGEKRPFISAGISALNSRDNE
ASFGADVSVSWQADLWGKLADNERAADLDITEQSLLYQSARDTLAAEVMQVWLTLIAQQR
AIDIEQQRNASLQQTESFIVQRYRQGLGTLEDLDSARSAVATSSASIESLKEVYRQQYIQ
LKTLIGQVDNPEFELPTEYPEVAIPEIDLPLQTLNRRPDLLAAYAAIEASSARTEVAYKD
LLPSLSLQAVLEDVGSSPRASLFTAPVWSLLGQLTAPLYQGGQLRAAAEISELDTAILYQ
QYRDTLLNAVTEVEQAISQEQALVKRQQHIETALASAENNLQQYQANYRSGLLNILDLLT
VQQQTYDLQAQLDDLIYQRLLNRISLGLALGLEAKA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgaccaagccagatagaagcctcaaaacactgacgattctgccattactgttg
cttacggcatgcagcatgacgccagagcaacccgattacgatagattgataactgctgaa
caacagcaggtgccagaatggcaaacactctcacaacaaactaatgtggcatatctaaat
gatctggtagatagcgatatgtttgaggacttgctgcagatcgccatgcaatccaacccc
ggcttgcagcaaacactgttaaccctgcaaattcgtcaatctcagctggtacaagctgcg
ggcgaaaaacggccttttatcagtgccggcatttcagcactcaatagccgtgacaatgaa
gccagttttggggctgatgtcagtgtcagctggcaagctgatttatggggaaaactggca
gataacgaacgagctgcagatctggatatcactgaacaaagccttttgtatcaatctgcc
cgtgataccttggctgctgaagtgatgcaagtatggttaaccctcatcgcccaacagaga
gccattgacatagaacaacagcgtaatgccagtttgcagcaaactgaaagctttattgtg
caacgttatcggcaaggcttggggacgttagaggaccttgacagtgcccgaagtgctgtc
gcgacctcgtcggccagcattgaaagtttgaaggaagtttatcgtcaacaatatatccag
ctcaaaactctgattggacaggttgataatccggaatttgagctaccaacagaatatcca
gaggtcgctattcccgaaattgatctgcccctgcaaactttaaatcgtcgtccggatctg
ctcgctgcgtatgcagctattgaagcttccagtgcacgaaccgaggtcgcctacaaagat
ttgttacccagtctgagtttacaagcggttctggaagatgtgggcagctctcctcgcgca
agtttatttaccgctcctgtctggagtttactgggacaattaacagcaccgttgtatcag
ggcggacaattacgcgctgcagcagaaatcagtgaattggacaccgctattctctatcag
caatatcgtgacacgttactcaacgcggtgacggaagttgagcaggcaatcagtcaagag
caggccctggtgaaacgtcagcaacatattgaaacggcacttgccagcgctgaaaataat
ttgcagcaatatcaggccaattatcgaagtgggctgctgaatattcttgacctgttaacc
gttcaacaacagacctacgatttgcaagcacagttagatgatctgatttatcaacgtttg
ctcaatcgaatttccttaggtctggcattggggctggaggcaaaagcatga
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