Candidatus Methylopumilus rimovensis: FIT61_00415
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Entry
FIT61_00415 CDS
T10495
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk01501
beta-Lactam resistance
mrk01503
Cationic antimicrobial peptide (CAMP) resistance
mrk02020
Two-component system
mrk03070
Bacterial secretion system
Brite
Transporters [BR:
mrk02000
]
Other transporters
Pores ion channels [TC:
1
]
FIT61_00415
Secretion system [BR:
mrk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FIT61_00415
RTX toxin transporter
FIT61_00415
Multiple protein transporter
FIT61_00415
RaxAB-RaxC type I secretion system protein
FIT61_00415
Antimicrobial resistance genes [BR:
mrk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FIT61_00415
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FIT61_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDD12961
UniProt:
A0AAE6KNP1
LinkDB
All DBs
Position
79481..80893
Genome browser
AA seq
470 aa
AA seq
DB search
MLIRIFILIVFNLFTLSYAADSFFYSDKDPDQIQQIPQGYIDPSIMDPCQTKAYNRPLSL
LEVTEAALCHNPNTKEVYANAKIQAAEVGVARSLFFPSLRDTVAVTENQIRSQTRGQNSF
RNTQNQIVASYLLYDFGGRDANLENANQLLKAASATQDAIVQRVLLSAVNAFYQVHANKA
ILKASIESERLFEESFKAAEAKYIAGIATPADKLQVNTSFASATLTRLTNEGLLRIAYGN
LATIMGAAPGTPIEIIDNDMDVMPEFIDQDIQALIEQAIIQRPDLIATESELKASLANIE
SVKAEAKPKVKIEASNQYDSETIFLKDINASQVGISVTIPFFEGYKPSYLIRSAEATAEL
KASKRDQLRLQVSLDVWTAYQNLKTANESIKASQILLTSAEESSHVALGRYKEGVGNIID
TLNAQSALASAKQQKIQSILNWNIARTTLAQSIGVLDNAMIQKLPEARRN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttgattagaatttttatccttatcgtttttaatttatttaccttaagttacgctgcc
gattcatttttttattctgataaagacccagatcaaattcagcaaatacctcaaggctat
attgatcctagtattatggacccatgccaaacgaaggcttacaacagacccttatctttg
cttgaagtgaccgaggcagctctttgtcataatccaaataccaaggaggtttatgccaac
gcaaagattcaggcagcggaagtgggggtagctcgatctttattttttccctcactaaga
gatacggtggctgtcacagagaatcagattcgtagtcaaaccagaggacaaaatagtttt
agaaatacccaaaatcaaatcgtagcatcatatcttttatatgattttgggggtcgagat
gctaacttagagaacgccaatcaacttttaaaagcagcaagcgccacccaagatgcaatc
gttcagagggttttgctgagcgcagtcaatgccttttatcaagtgcatgcaaataaagca
attttgaaagcatcaattgagtcagaaagactttttgaagaaagttttaaagctgcagaa
gccaaatatattgcaggtattgcaacccctgcagataaacttcaagtcaacacttcattt
gccagtgccaccttgactagacttactaatgaagggttgcttagaattgcttatggaaat
ttagccactatcatgggggcagcccctggaacacctattgaaattatagataatgacatg
gatgttatgcctgaatttattgatcaggatatccaagcattaattgagcaggccataatc
cagaggcctgacttaattgcaacggagtcagagttaaaggcttcactggctaacattgaa
tcagtaaaagcagaggcaaaacctaaagtgaaaattgaagcatccaatcagtatgatagc
gagacaatttttcttaaggatataaacgcttcacaagttggtatatcggtgaccattcct
ttttttgaaggctataaaccaagttatctgattcgatccgcagaagcgactgcagaactt
aaagcgtcaaaacgtgatcaattgagactacaagtttctctcgatgtatggacagcctat
caaaatcttaaaacagccaatgaatcgattaaggcttctcaaatactattgactagcgct
gaagagtcgtctcacgtggccttaggccgctataaagaaggcgttggaaatattattgat
acactcaatgctcaaagtgcacttgcaagcgcaaagcaacaaaaaattcagtctatttta
aattggaatattgcgcgcacaacgcttgctcaatctataggtgtccttgataatgcaatg
atccaaaaattacctgaggcaaggcgaaattag
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