Methylocaldum szegediense: MSZNOR_4396
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Entry
MSZNOR_4396 CDS
T09668
Name
(GenBank) NodT family efflux transporter outer membrane factor (OMF) lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
msze
Methylocaldum szegediense
Pathway
msze01501
beta-Lactam resistance
msze02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSZNOR_4396
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MSZNOR_4396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msze02000
]
MSZNOR_4396
01504 Antimicrobial resistance genes [BR:
msze01504
]
MSZNOR_4396
Transporters [BR:
msze02000
]
Other transporters
Pores ion channels [TC:
1
]
MSZNOR_4396
Antimicrobial resistance genes [BR:
msze01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MSZNOR_4396
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
MSZNOR_4396
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
MSZNOR_4396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PI3K_P85_iSH2
Motif
Other DBs
NCBI-ProteinID:
CAI8948620
UniProt:
A0ABN8X8U0
LinkDB
All DBs
Position
MSZNORmain:4261221..4262723
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AA seq
500 aa
AA seq
DB search
MRLGTIHRRLLAGSLALFLIGGCAWIPSGGQRAEFTQTPPDMAQKLSAVRGDESLKVRPS
WPNNRWWLQFGSSELNYLMDMALKDNPGVKAAAARLREAEGFARVEGARLLPFLDAEAEV
ATARFSEYSVNVALRGAHTVSALINPFSLRYEFDFWGKNRAALEAALGEAAAEEAELAKV
RLQLTAAIARCYFRGVALRQQLDLAEEMVGLRRQLLELARTRYDLGLDSADPVKQAETEL
QTASKRHAATRDYLDLQRNLLARLIGRGPDATQHLFNRRVNLPERIPLPEKLPLELLAHR
PDLAAALHRAEAAAQRIKVAKASFYPTVDLTAFVGFNALRMTKGASSLANILFSGNSFAY
GVAPGVRLPIFEGGRLRGQLSVQRAEYDEAVELYNKTLLQAIQEVADSLSNWRDTQKIVE
AQNRLLTSQREALDLALERLRSGLDDRRAVLARQHAVLDHEYALKTFETDQYVAMTDLIE
ALGGGYSNGLDATRLQPMSD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgggaacgatccatcgtcgcctgctcgcgggctccctagcgctatttctgatc
gggggttgcgcctggattccttcgggcggccaacgtgccgagttcacccaaacgccgccg
gatatggcccagaaattgtccgcggtccgcggagacgagtcgctgaaggtgcgaccgtct
tggcccaacaaccgctggtggctgcagttcggcagttccgagctgaactatctaatggat
atggcgctcaaggacaatcccggcgtcaaggcggctgcggcgaggttacgcgaggcggaa
ggtttcgcccgggtcgaaggggcgaggctactgcccttcctcgacgctgaggcggaggtc
gcaacggcacggttttcggagtacagcgtcaatgtcgccctaagaggtgcgcataccgtc
tcggcgctgatcaatccttttagcctacgctacgaattcgatttctggggtaagaatcgt
gccgcgttggaagcggccctcggcgaagcggcggccgaagaggcggagctggccaaagtc
aggctgcaattgacggcggcgatagcgagatgttacttccgaggcgtcgcgctacgccaa
cagctcgatttggcggaagagatggtcggcttgcggcggcaattgctcgaactggcaagg
acgcgctatgacttgggtttggattccgctgatcccgtcaagcaggccgaaacggaacta
cagacggccagcaagcgccacgccgcgacccgtgactatttggacctgcagcgtaacctg
ttggcgcgtctgattggccgcggtcccgatgctacacagcacctgttcaaccggcgggtc
aatctgcccgaaagaattccgctgcccgagaagcttcccctggaactgctcgcccatcgc
ccggatctggcggcagcactgcacagggccgaagcggccgcgcagcggatcaaggtggct
aaagccagcttttacccgaccgtcgatttgacggcttttgtcgggttcaacgcgttgcgt
atgaccaagggtgcgagctccctcgccaatattctgttttcggggaacagcttcgcgtac
ggcgtcgcgcccggcgttaggcttcctattttcgaggggggacgtctgcgcggtcaattg
tcggtacagcgggcggaatacgacgaggccgttgagctttacaacaagactctgctgcag
gcgattcaggaagtcgccgatagcctcagtaattggcgcgacactcaaaaaattgtcgag
gcgcagaaccgtctgttgacttcgcagcgcgaggcgctcgatctcgccctggagcggctt
cgaagcggtttagacgaccgccgagcggtgctggcgcgccagcacgccgtattggatcac
gagtacgcgctaaagacgtttgaaaccgatcagtatgtcgccatgaccgatcttattgag
gccttgggcggaggctattcgaacggtctcgacgccacacgcctgcagccgatgtcggat
tga
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