Methylophaga thalassica: VSX76_08985
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Entry
VSX76_08985 CDS
T09743
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
mtha
Methylophaga thalassica
Pathway
mtha01501
beta-Lactam resistance
mtha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSX76_08985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSX76_08985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_08985
01504 Antimicrobial resistance genes [BR:
mtha01504
]
VSX76_08985
Transporters [BR:
mtha02000
]
Other transporters
Pores ion channels [TC:
1
]
VSX76_08985
Antimicrobial resistance genes [BR:
mtha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VSX76_08985
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VSX76_08985
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VSX76_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF2730
Spike_torovirin
Motif
Other DBs
NCBI-ProteinID:
WVI86735
LinkDB
All DBs
Position
1:1502617..1504089
Genome browser
AA seq
490 aa
AA seq
DB search
MKTLFLLFPYTMLLLLSACISSEGIVPQSDVPVDNTFQLSEHVQEIQEDAAWPTDQWWQC
FQDEQLNQLMQLAVSQSPSVQESQARIRLATSLAAQTDAALSPTMDAEAQINRKRWPTDY
FYGPGELGGTTSWNNTGLLSLHYDPDIWNKNSLQSEVALSEIKKQTAKSQIAKLNIESAL
MSSYIQLSLNHDELELAQQAVNTYQEKLDVIKAQLKMGLNTEVAVHQAETQLADTEAKLE
AVKDHIVIAKHAIAALLGKGPAFADSLKPPHLKRTDEVSLPSHIPAELLGHRPDVVASRW
LVFSANKHIDIAHTAFYPNINLSAAIGFMAVNGSVLSVFSHDKLTYDAGPAISLPIFDAG
RIRGELSEATASYDMTVALYKKTLTEAMQQIADSAVSLKSSLTQSATLASAIKASHQAYL
HANDAYEVGLTDYLPVLDARLAWLQQQLFSQQINAQVLQYRADLIIALGGGLTTEDDGPK
QAALRYQEKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacgttatttcttctttttccttacacgatgttgctacttttgtctgcttgcatc
agctctgagggtattgtgccgcagagtgatgtgccggtagataacaccttccaattaagc
gaacatgtgcaagaaatacaagaagatgcggcgtggccgacagatcagtggtggcaatgt
tttcaggatgaacaacttaatcagttaatgcagcttgccgtcagccaaagcccatcggtg
caggaatcacaggcaaggattcggctggctacgtcattagcggcacagaccgatgctgct
ttatcgccaacaatggatgctgaagctcaaattaaccgtaaacgttggccgacggattat
ttctacggcccgggcgagttgggcggtaccaccagttggaataatacaggcttactcagc
ctccactatgatcctgatatttggaataaaaactcactgcaaagtgaagtggcattaagt
gagattaaaaagcaaacagcaaaaagccagatagcgaagctgaatatcgaatccgcatta
atgtcttcatatattcaactgtcactgaatcacgatgagctggaactggctcagcaggct
gtgaacacctatcaagagaagcttgatgtgataaaagcacagctgaaaatgggcttgaat
acggaagttgcggtacatcaggctgaaacgcagcttgctgacactgaggcaaaacttgaa
gcagttaaggatcatattgtgatagccaaacatgcaattgcggctttattaggtaaaggt
ccagcgtttgctgacagtctaaaaccaccacacttaaagagaacagacgaggtgtcttta
cccagtcatataccagctgaattacttgggcataggccggatgtggtggcaagccgctgg
ttagtgttcagtgcaaataaacatattgatattgctcatactgctttttatccgaatatt
aatctttccgctgctatcggtttcatggctgttaacggaagcgtattaagtgtttttagt
cacgacaaactgacctacgatgcaggaccagccatctctctgccgatttttgatgcaggc
agaattagaggtgagttatctgaagcaacggccagttatgatatgacagtggccctgtac
aaaaaaaccttaactgaggcgatgcagcaaattgcagatagcgccgtctcattgaaaagt
tcgctgacacaatcagcaacactggcctctgctattaaggcatcacatcaggcatatcta
catgcaaatgacgcctatgaagtggggctgacggattatttacccgtactggatgccaga
ctggcctggttacagcaacagcttttttctcaacaaataaatgcacaggtgctgcaatat
cgggctgacctcattattgcattaggcggagggctgaccacagaggatgatggtccaaaa
caagctgcacttcggtatcaggaaaaaccttaa
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