KEGG   PATHWAY: mthn00572
Entry
mthn00572                   Pathway                                
Name
Arabinogalactan biosynthesis - Mycobacterium - Mycolicibacterium thermoresistibile
Description
Just like lipoarabinomannan (map00571), arabinogalactan (AG) is a major heteropolysaccharide found on the mycobacterium cell wall. AG consists of a linear galactan chain of galactofuranosyl (Galf) residues covalently connected to peptidoglycan (PG), with branches of three similar arabinan chains comprising arabinofuranosyl (Araf) residues. The non-reducing ends of arabinans are often covalently attached to the long fatty acids of mycolic acids. Thus, the covalently linked network of PG and mycolylated AG, termed the mycolyl-arabinogalactan-peptidoglycan (mAGP) complex, forms an exceptionally robust cell wall and provides a permeability barrier to antibiotics.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
mthn00572  Arabinogalactan biosynthesis - Mycobacterium
mthn00572

Module
mthn_M00888  Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5 [PATH:mthn00572]
Organism
Mycolicibacterium thermoresistibile [GN:mthn]
Gene
4412656_00251  [KO:K16648] [EC:2.4.2.-]
4412656_01181  msrR_1; cell envelope-related transcriptional attenuator [KO:K27775]
4412656_01183  wbbL; putative glycosyltransferase [KO:K16870] [EC:2.4.1.289]
4412656_01363  fbpB; esterase [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_02288  fbpC_2; secreted antigen 85-C FbpC [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_02315  fbpC_3; putative esterase [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_02700  [KO:K16647] [EC:2.4.2.47]
4412656_03176  wecA; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [KO:K02851] [EC:2.7.8.33 2.7.8.35]
4412656_03604  fbpC_4; putative esterase [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_04377  glfT1; putative glycosyltransferase [KO:K16649] [EC:2.4.1.287]
4412656_04394  aftA; Arabinofuranosyltransferase N terminal/Arabinofuranosyltransferase A C terminal [KO:K13686] [EC:2.4.2.46]
4412656_04396  embA; integral membrane indolylacetylinositol arabinosyltransferase EmbA [KO:K11385] [EC:2.4.2.-]
4412656_04397  embC_2; cell wall arabinan synthesis protein [KO:K11386] [EC:2.4.2.-]
4412656_04405  fbpC_5; putative esterase [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_04406  fbpA_2; secreted antigen 85-A FbpA [KO:K18851] [EC:2.3.1.20 2.3.1.122 2.3.1.-]
4412656_04407  [KO:K13687] [EC:2.4.2.-]
4412656_04410  glfT2; glycosyltransferases-like protein [KO:K16650] [EC:2.4.1.288]
Compound
C00569  Arabinogalactan
C02970  Decaprenol phosphate
C03319  dTDP-L-rhamnose
C05896  Crosslinked peptidoglycan
C17481  AGP
C21904  Mycobacterial trehalose monomycolate
C22876  Trehalose monomycolate
C22879  mAGP
G10610  UDP-N-acetyl-D-glucosamine
G13118  GlcNAc-pyrophosphoryldecaprenol
G13119  Rhamnosyl-N-acetyl-glucosaminyl-decaprenyl diphosphate
G13120  Glycolipid 3
G13121  Glycolipid 4
G13122  Glycolipid 5
G13123  C50-P-P-GlcNAc-Rha-linked galactan polymer
G13124  
G13125  UDP-alpha-D-galactofuranose
Reference
  Authors
Jankute M, Grover S, Birch HL, Besra GS
  Title
Genetics of Mycobacterial Arabinogalactan and Lipoarabinomannan Assembly.
  Journal
Microbiol Spectr 2:MGM2-0013-2013 (2014)
DOI:10.1128/microbiolspec.MGM2-0013-2013
Reference
  Authors
Jankute M, Cox JA, Harrison J, Besra GS
  Title
Assembly of the Mycobacterial Cell Wall.
  Journal
Annu Rev Microbiol 69:405-23 (2015)
DOI:10.1146/annurev-micro-091014-104121
Reference
  Authors
Angala SK, Belardinelli JM, Huc-Claustre E, Wheat WH, Jackson M
  Title
The cell envelope glycoconjugates of Mycobacterium tuberculosis.
  Journal
Crit Rev Biochem Mol Biol 49:361-99 (2014)
DOI:10.3109/10409238.2014.925420
Reference
  Authors
Birch HL, Alderwick LJ, Bhatt A, Rittmann D, Krumbach K, Singh A, Bai Y, Lowary TL, Eggeling L, Besra GS
  Title
Biosynthesis of mycobacterial arabinogalactan: identification of a novel alpha(1-->3) arabinofuranosyltransferase.
  Journal
Mol Microbiol 69:1191-206 (2008)
DOI:10.1111/j.1365-2958.2008.06354.x
Reference
  Authors
Belanova M, Dianiskova P, Brennan PJ, Completo GC, Rose NL, Lowary TL, Mikusova K
  Title
Galactosyl transferases in mycobacterial cell wall synthesis.
  Journal
J Bacteriol 190:1141-5 (2008)
DOI:10.1128/JB.01326-07
Reference
  Authors
Alderwick LJ, Seidel M, Sahm H, Besra GS, Eggeling L
  Title
Identification of a novel arabinofuranosyltransferase (AftA) involved in cell wall arabinan biosynthesis in Mycobacterium tuberculosis.
  Journal
J Biol Chem 281:15653-61 (2006)
DOI:10.1074/jbc.M600045200
Reference
PMID:1906464
  Authors
McNeil M, Daffe M, Brennan PJ
  Title
Location of the mycolyl ester substituents in the cell walls of mycobacteria.
  Journal
J Biol Chem 266:13217-23 (1991)
Reference
  Authors
Grzegorzewicz AE, de Sousa-d'Auria C, McNeil MR, Huc-Claustre E, Jones V, Petit C, Angala SK, Zemanova J, Wang Q, Belardinelli JM, Gao Q, Ishizaki Y, Mikusova K, Brennan PJ, Ronning DR, Chami M, Houssin C, Jackson M
  Title
Assembling of the Mycobacterium tuberculosis Cell Wall Core.
  Journal
J Biol Chem 291:18867-79 (2016)
DOI:10.1074/jbc.M116.739227
Reference
  Authors
Bhamidi S, Scherman MS, Jones V, Crick DC, Belisle JT, Brennan PJ, McNeil MR
  Title
Detailed structural and quantitative analysis reveals the spatial organization of the cell walls of in vivo grown Mycobacterium leprae and in vitro grown Mycobacterium tuberculosis.
  Journal
J Biol Chem 286:23168-77 (2011)
DOI:10.1074/jbc.M110.210534
Related
pathway
mthn00074  Mycolic acid biosynthesis
mthn00520  Amino sugar and nucleotide sugar metabolism
mthn00523  Polyketide sugar unit biosynthesis
mthn00550  Peptidoglycan biosynthesis
KO pathway
ko00572   

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