Sciurus carolinensis (gray squirrel): 124960707
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Entry
124960707 CDS
T08117
Name
(RefSeq) prothrombin-like isoform X1
KO
K01313
coagulation factor II (thrombin) [EC:
3.4.21.5
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04072
Phospholipase D signaling pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04610
Complement and coagulation cascades
ncar04611
Platelet activation
ncar04810
Regulation of actin cytoskeleton
ncar05171
Coronavirus disease - COVID-19
ncar05200
Pathways in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04072 Phospholipase D signaling pathway
124960707
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124960707
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124960707
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
124960707
04611 Platelet activation
124960707
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124960707
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124960707
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124960707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124960707
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124960707
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.5 thrombin
124960707
Peptidases and inhibitors [BR:
ncar01002
]
Serine peptidases
Family S1: chymotrypsin family
124960707
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
124960707
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
124960707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Thrombin_light
Gla
DUF1986
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
124960707
NCBI-ProteinID:
XP_047375561
LinkDB
All DBs
Position
11:complement(32698809..32715458)
Genome browser
AA seq
659 aa
AA seq
DB search
MAHEGGLGLSGCLALAALVSLVHSQNEPLSGASRPGQAGFLPPQWLRQSGSLRRPSFDPP
AAVFLAPQQALSLLQRVRRANSGFLEELRKGNLERECVEEQCSYEEAFEALESTSATDAF
WAKYTACEPVRKPRENFMECMEGNCAKDLGVNYRGNVNITRSGIECQLWRSRYPHKPDIN
FTTHPGAELKENFCRNPDGSTTGPWCYTTDPTVRREECSVPVCAGEGRVTVEMTPRSGGS
RGNLSPPSEQCVPERGQQYEGHLSVTMHGSPCLSWSSPQAKALSKDQDFSPEVKLVENFC
RNPDGDEEGAWCYVAGHAGDFEYCDLNYCEEAVEEETGDAQGEDGDAAIGGRTTTEEFQN
FFDEKTFGSGEADCGLRPLFEKKNVKDKTEDELFESYIDGRIVEGWDAEIGIAPWQVMIF
RKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS
MLEKIHIHPRYNWRENLDRDIALLKLKKPIAFSDHIHPVCLPDKQTAVSLLQAGYKGRVT
GWGNLKETWTTSVNEVQPSVLQVVNVPIVERPVCKASTRIRITDNMFCAGYKPGEGKRGD
ACEGDSGGPFVMKSPFNERWYQMGIVSWGEGCDRNGKYGFYTHVFRLKKWIQKIIDRFG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgaaggaggcctggggctctctggctgcctggccctggctgccctagttagc
cttgtgcacagccagaatgaacccctctcgggagccagcaggccaggccaggctggcttc
ctgcccccgcaatggctaagacagtctggctccctgaggcgaccgtccttcgaccctcca
gccgcagtgttcctggcccctcagcaagcgctgtcgctgctccagcgggtccgccgggcc
aacagtggcttcctggaggagctgcgcaagggcaacctggagcgggagtgcgtggaggag
cagtgcagctacgaggaggccttcgaggccctggagtccaccagcgccacggatgcattc
tgggccaagtacacagcttgtgagccagtgaggaaacctagggagaacttcatggagtgt
atggaaggtaactgtgccaaggatctgggtgtgaactaccgaggaaatgtgaacatcacc
cggtcaggcatcgagtgtcagctgtggaggagtcgctacccacataaacctgacatcaac
ttcaccacccatcctggggcggaactgaaggagaatttctgccgcaacccggatggcagc
accacagggccctggtgctacaccacagaccccacggtgcggagggaagaatgcagtgtc
cccgtctgtgcaggtgaggggcgtgtcactgtggagatgactccccgctctggaggctcc
agggggaacctgtcaccgccatcggagcagtgtgtccctgagcgtggccagcagtacgaa
gggcacctgtcagtgacaatgcacgggtccccctgcctatcctggtccagcccacaggcc
aaggccctgagcaaggaccaggattttagcccagaggtgaagctggtggaaaacttctgt
cgaaacccagatggggatgaggagggcgcctggtgctacgtggctgggcacgctggtgac
tttgagtactgcgacctcaactactgtgaggaggctgtggaagaggagacaggggacgca
cagggtgaggatggggacgcggccattggagggcgcaccaccacggaggagttccagaac
ttctttgatgagaagacctttggcagcggggaggcagactgtgggctgcggcctctgttc
gagaagaagaatgtgaaagacaaaaccgaagatgagcttttcgagtcttacattgatggg
cgcattgtggagggctgggacgctgaaattggcatcgcaccttggcaggtgatgattttc
aggaagagtccccaggagctgttgtgtggggccagtctcatcagtgaccgctgggtcctc
acagctgctcactgccttctgtacccaccctgggacaagaacttcaccgagaatgacctt
ttggtgcgcattggcaagcactcccgcaccagatacgagcggaacattgagaagatatcc
atgctggagaagatccacatccaccccaggtacaactggcgggagaacctggaccgggac
attgccctgctgaagctcaagaagcccatcgctttcagcgaccacattcaccctgtgtgc
ttgcccgacaagcagacagcagtcagcttgctccaggctggatataaagggcgggtcaca
ggctggggcaatctgaaggagacgtggacgaccagcgtcaatgaggtgcagcccagtgtc
ctgcaggtggtgaacgtgcccatcgtggagcggccagtctgcaaggcctccacccggatc
cgcattacggacaacatgttctgtgctggttataaaccaggcgaagggaaacgaggagat
gcttgtgaaggtgacagtgggggaccctttgtcatgaagagtccctttaacgaacgctgg
tatcaaatgggcatcgtctcatggggtgaaggatgtgaccggaatgggaaatatggcttc
tacacacatgtgttccgtctgaaaaagtggatacagaagatcattgataggtttggataa
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