Sciurus carolinensis (gray squirrel): 124982534
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Entry
124982534 CDS
T08117
Name
(RefSeq) complement C1r subcomponent
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04145
Phagosome
ncar04610
Complement and coagulation cascades
ncar05133
Pertussis
ncar05150
Staphylococcus aureus infection
ncar05171
Coronavirus disease - COVID-19
ncar05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124982534
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
124982534
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124982534
09171 Infectious disease: bacterial
05133 Pertussis
124982534
05150 Staphylococcus aureus infection
124982534
09163 Immune disease
05322 Systemic lupus erythematosus
124982534
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124982534
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124982534
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
124982534
Peptidases and inhibitors [BR:
ncar01002
]
Serine peptidases
Family S1: chymotrypsin family
124982534
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Phagocytosis
Opsonins
124982534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
EGF
hEGF
Peptidase_S6
DUF316
Motif
Other DBs
NCBI-GeneID:
124982534
NCBI-ProteinID:
XP_047405288
LinkDB
All DBs
Position
4:complement(72685926..72696002)
Genome browser
AA seq
705 aa
AA seq
DB search
MWLFSLLVPALFCRAGGSILIPQKLFGEVTSPLYPKPYPNNFETTTVITVPKGYRVKLVF
WHFDVEPSEGCFYDYVKVSADKKDLGRFCGQLGSALGNPPGKKEFLSQGNKMMLTFHTDF
SNEENGTSMFYKGFLAYYHAVDLDECASQHNSAEEDSQPQCQHLCHNYIGGYFCSCRPGY
ELQKDRHSCHAECSSGLYTEPSGYISSLEYPQPYPPDLRCNYSIRVERGLNLHLKFLEPF
EIDDHQQVHCPYDQLQIYANGKNMGEFCGNQRPPDLDTSSNAVDLLFFTDESGDSRGWKL
HYTTDIIKCPQPKTLDEFTIIQKLQPQYQFRDYFIATCKQGYQLVEGKQALFSFTAVCQD
DGTWHRAMPRCKIKDCGQPQSLSNGDFHYITTKGVNTYEAKIQYHCHEPYYKMQIRAGSN
ESTRGLYTCTAQGIWKNDQEGEKIPRCLPVCGKPTNPVQQKQRIIGGQKAQPGNFPWQAY
TIIHGPGGGALLGDRWILTAAHTLYPKDFNVQENVTKDVFLGHTNVEQIQKLGNHPVHRV
IIHPDYRQEESHNFEGDIALLELENSVTLGPNLLPICLPDNETFYEKGLMGYVSGFGITE
EKIAENLRFVRLPVADREACEKWLQKKQTNDVFSQNMFCTGDPSLKQDACQGDSGGVFAV
RDHKRDRWVATGIVSWGIGCSKGYGFYTKLLNYVDWIKKEIGEEV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcttctccctcttggtgccagccctgttctgcagagcaggaggctccatcctc
atccctcagaagctttttggggaagtgacttcccctctgtatcccaagccttaccccaac
aactttgagacaaccactgtgatcacagtccccaagggatacagggtgaaacttgtcttc
tggcattttgacgtggagccttctgaaggctgtttctatgactacgtcaaggtctcggct
gataagaaagacctggggaggttctgtgggcagctggggtctgcactgggcaacccccca
gggaagaaagaatttttgtcccaagggaacaagatgatgctgactttccacacagacttc
tccaatgaggagaatgggaccagcatgttctacaagggcttcctggcctactaccatgct
gtggacctcgatgaatgtgcttcccagcacaactcagcggaagaggattcccagccacag
tgccagcacctatgtcacaactacattggtggctacttctgttcctgccgtccaggctat
gagcttcagaaggataggcattcctgccatgccgaatgcagcagcgggctgtacacagag
ccatcaggctacatctccagtctggagtatccccagccctatccccctgacttgcgctgc
aactacagtatccgtgtagagcggggcctcaaccttcacctcaagttcctagagcctttt
gaaattgacgaccaccagcaagtgcactgcccctatgaccagctccagatctacgccaat
gggaagaacatgggcgagttctgtgggaatcaaagacctcctgatcttgacaccagcagc
aatgccgtggatctgctgttcttcacagatgaatcaggggacagcaggggctggaagctg
cactataccactgacatcatcaagtgcccccagcctaagaccctggatgagttcaccatc
atccaaaaactgcagcctcagtaccagttccgtgactacttcatcgccacctgcaaacaa
ggctaccagctcgtggaggggaaacaggcgctgttctccttcacagccgtctgccaggat
gatggcacatggcatcgtgccatgcccaggtgcaagatcaaggactgtgggcagccccaa
agcctgtctaatggggacttccattacatcaccacaaagggagtgaacacctatgaggcc
aagatccagtaccactgccatgagccatattacaagatgcagatcagagctggcagcaac
gagtccacacgagggttgtatacctgcacagcccagggcatctggaagaatgaccaggaa
ggagagaaaattcctcggtgtttgccagtgtgtgggaagcccaccaaccccgtgcaacag
aagcagcgcatcattggagggcaaaaagcgcagcccggcaacttcccctggcaggcgtac
accatcatccatgggccagggggtggggccctgctgggagaccgctggatcctcacagct
gcccacactctctaccccaaggatttcaacgtacaggaaaatgtcaccaaggatgtgttc
ttgggccacacaaatgtggagcagatccagaaattgggaaatcaccctgtccacagggtt
atcattcacccagactatcgtcaggaggagtcccacaattttgagggggacattgccctg
ttggagcttgaaaacagcgtcaccctgggccccaacctcctccccatctgcctccctgac
aatgagaccttttatgagaaaggtctcatgggctatgtcagtggctttgggataacagag
gagaagattgctgaaaacctcaggtttgttcgattacctgtagctgatcgagaggcatgt
gagaaatggctccagaaaaaacagactaatgatgttttttctcaaaacatgttctgtacg
ggggacccatctctaaagcaggatgcctgccagggtgacagtggaggtgtttttgcagtg
agggaccacaagagagatcgctgggtggctacaggcatagtatcctggggcattggatgc
agtaaaggatatggcttctacaccaaactactcaactatgtggactggatcaagaaagag
attggagaggaggtctga
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