Sciurus carolinensis (gray squirrel): 124983355
Help
Entry
124983355 CDS
T08117
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase-like isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04622
RIG-I-like receptor signaling pathway
ncar04623
Cytosolic DNA-sensing pathway
ncar05162
Measles
ncar05164
Influenza A
ncar05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124983355
04623 Cytosolic DNA-sensing pathway
124983355
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124983355
05164 Influenza A
124983355
05162 Measles
124983355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124983355
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
124983355
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124983355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
z-alpha
dsrm
TrmB
MarR_2
Dicer_dimer
PF0610-like_N
HTH_9
LexA_DNA_bind
FaeA
DnaD_N
EAP30
EutK_C
DUF2250
HTH_24
Motif
Other DBs
NCBI-GeneID:
124983355
NCBI-ProteinID:
XP_047406537
LinkDB
All DBs
Position
1:95236680..95264177
Genome browser
AA seq
1175 aa
AA seq
DB search
MDPRQGCFFNRRCPRPGQGYEHSKARQQQPWQESHTNSFRLQQIEFLQGRLSEVPLTGKQ
TPSLPPPVFFPGHWSRFPGPPVETRQPEIWGACSGVRLRSQGLQVVSQLPLPAGRSLPWR
GVDRLSSRFQELNISQDQEKRILEFLKELGEGKDTTARELARKLRIPKKEVNQTLYSLVK
KGKLQRRPGIPPLWSITVSVQAWSQPSEVAKPDIHRGAPNSELHSESEESSPTSDLEEPS
EPFDMAEIKEKICDYLFNVSNCSALSLAKNIGFTRARDVNAVLSDLEKQGDVYRKGAIPT
WYLTDKKRERMQIKRNTHSALAATPGAVPETNRNTAFPTYHLPPSNASNNMMTTEKVENG
QEPILKLEGRQEPRPGPMKLKPPVYHNGPSKAGYVDFENGQWATDDIPDDLNSIHAAPGE
FRAIMEMPSFYSHGLPRCSPYKKLTECQLKNPISGLLEYAQFASQTCEFNLIEQSGPPHE
PRFKFQVVISGREFPPAEAGSKKVAKQDAALKAMTILLQEAKAKDSGKPEDLSCYSTEKE
PEKIAEPQPTTTSTPSLFSGKSPVTTLLECMHKLGNSCEFRLLSKEGPAHDPKFQYCVAV
GAQTFPTVSAPSKKVAKQMAAEEAMKALHEEATNSIDDQSGGTNSESLDNLDSGMPNKIR
RIGELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFIYQAKVGGRWFPAVCA
HSKKQGKQEAADAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLP
LTGSTFHDQIAMLSHRCFNALTNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCV
KGDSLSLKGETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFELARGGEKLQIKKT
VSFHLYISTAPCGDGALFDKSCSDRAVESTDSRHYPVFENPKQGKLRTKVENGEGTIPVE
SSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGYLFSQG
HLTRAICCRVTRDGSAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCLADGY
DLEILDGTRGTVDGPRNELSRVSKKNIFLQFKKLCSFRYRRDLLKLSYGEAKKAARDYEI
TKNYFKKSLKDMGYGNWISKPQEEKNFYLCPVPND
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcggcaggggtgtttcttcaacagacgctgcccccgccccggtcaaggatat
gagcacagcaaggccagacagcagcagccttggcaggaatctcacactaatagtttccgg
ctccagcaaatagagttcctccaggggcggctctcagaagtgcccctaactggaaagcag
acaccatccctgccaccaccagtattcttcccaggacactggtcaaggtttccgggacca
cctgttgaaaccaggcagcctgagatctggggtgcctgtagcggcgtgcgtctcagaagt
caggggctccaggtagtgtctcagcttcctttgccagctggcaggagtctgccatggaga
ggtgttgacaggctttcctcacgcttccaggagctgaacatcagccaggatcaggaaaaa
aggatcttagagttcttaaaggagctcggggaagggaaggacaccacagcgcgagaactg
gccaggaagctcaggattccgaagaaagaagtcaatcaaactttatattctctggtgaag
aagggtaagctacagaggaggccaggaatacctcctttgtggagcatcacagtctctgtt
caggcctggagccagcccagcgaagtagcaaaacctgacattcataggggagccccaaat
tcagagctccattcagaatctgaagaaagtagccccacatctgatttagaagaaccttct
gagccttttgacatggctgagatcaaggagaaaatctgtgactacctgttcaatgtgtct
aactgctctgccctgagtctggctaaaaatattggcttcaccagagcccgagatgtaaat
gcagtgctgagtgacttggaaaagcagggcgatgtgtacaggaaaggggcaattcccaca
tggtacttgacagacaagaagcgcgagaggatgcaaatcaagagaaatacacacagtgct
cttgcagccactccgggtgctgtccccgagaccaatagaaacacggcattccccacctat
cacctaccaccgtcaaatgcctcaaacaacatgatgaccacagaaaaagtggagaatggg
caggaacctatcttgaagttagaaggtagacaggagcccagaccaggaccaatgaaactg
aaaccacctgtttatcacaatggcccctctaaagcagggtatgttgactttgaaaatggc
cagtgggccacagatgacatcccagatgacttgaatagtatccatgcggcaccaggtgag
tttcgagccatcatggagatgccctccttctacagccatggcttgccacggtgttcaccc
tacaagaaactgacagagtgccagctgaagaaccccatcagcgggctgttagagtatgct
cagttcgctagtcagacctgtgagttcaacctgatagagcagagtggaccaccccatgaa
cctcgatttaaattccaggttgtcatcagtggccgagagtttcccccagctgaagctggc
agcaagaaagtggccaagcaggatgcagctctgaaagccatgacaatcctgcttcaggag
gccaaagccaaggacagtggaaagccagaggacttatcctgctattccacagagaaagaa
ccagagaagatagcagagccccagcctactaccacttcaacaccatccttattttctgga
aagagccctgtcactacattgcttgagtgtatgcacaaattggggaactcctgtgaattc
cggctcctgtccaaagaaggccctgcccatgaccccaagttccagtactgtgtggctgtg
ggagcccaaactttccccactgtgagtgcccccagcaagaaagtggcaaagcaaatggcc
gcagaagaagccatgaaggccctgcacgaggaggcaaccaactcaattgatgaccagtct
ggaggtacgaactcagaatcactggacaacttggactctgggatgcccaacaagatcagg
aggattggtgagctcgtcagatacctgaataccaaccctgtgggtggcttgttagagtat
gcccgctcccatggctttgctgctgagttcaagttggtggaccagtctggacctcctcat
gaacccaagttcatttaccaagcaaaagttgggggccgctggtttccagccgtctgcgca
cacagcaagaagcaaggcaagcaggaagcagcagatgcggccctccgtgtcttgattggg
gagaacgagaaggcagaacgcatgggtttcacagaggtaaccccagtgacaggggccagt
ctcagaagaactatgctcctcctctccaggtccccagaagcacagccaaagacacttcct
cttactggcagtaccttccatgaccagatagcaatgctgagccaccggtgcttcaatgct
ctcacaaacagtttccaaccttccttgctcggccgcaagatcctggctgccatcattatg
aagaaagactctgaggacatgggtgtcgtggtcagcttggggacagggaatcgctgtgtg
aaaggagattctctcagcctaaagggagaaaccgtcaacgactgtcatgcggaaatcatc
tcccggagaggcttcatcaggtttctttacagtgagttaatgaaatacaactcccagact
gcaaaggatagtatatttgagcttgctaggggaggagagaagctccaaataaaaaagact
gtttcgtttcatctgtatatcagcaccgctccatgtggagatggcgccctctttgacaag
tcctgcagtgaccgggctgtggaaagcacagattcccgccactaccctgtctttgagaat
cccaaacaaggcaagctccgcaccaaggtggagaatggggaaggcacaatccctgtggag
tccagtgacattgtgcctacatgggatggcattcggctcggggagagactccgtaccatg
tcctgtagtgacaaaatcctacgctggaatgtgctgggcctacaaggggcactgctgacc
cacttcctgcagcctgtgtatctcaaatctgtcacactgggttaccttttcagccaagga
catctgacccgtgctatctgctgtcgtgtgacaagagatgggagtgcattcgaggatgga
ttgcgataccccttcattgtcaaccaccccaaggttggccgagtcagcgtatatgattcc
aaaaggcaatctgggaagactaaggagacgagtgtcaactggtgtttggctgatggctat
gacctagagatcctggatggtaccagaggcaccgtggacgggccacgaaatgaattgtcc
cgggtatctaaaaagaacatttttcttcagtttaagaagctctgctccttccgttaccgc
agggacttactgaaactctcctatggtgaggccaagaaagctgcccgagactatgagata
accaagaactacttcaaaaagagcctaaaggacatgggttatggaaactggataagcaaa
ccccaggaggaaaagaacttttatctctgcccagtccccaatgactga
DBGET
integrated database retrieval system
