Nitrosopumilus cobalaminigenes: C5F47_01015
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Entry
C5F47_01015 CDS
T06688
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl00650
Butanoate metabolism
ncl00720
Other carbon fixation pathways
ncl01100
Metabolic pathways
ncl01120
Microbial metabolism in diverse environments
ncl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C5F47_01015
09102 Energy metabolism
00720 Other carbon fixation pathways
C5F47_01015
Enzymes [BR:
ncl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
C5F47_01015
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
C5F47_01015
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Herpes_LP
Motif
Other DBs
NCBI-ProteinID:
QLH02252
UniProt:
A0A7D5LYV1
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All DBs
Position
190066..191592
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AA seq
508 aa
AA seq
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MANVLKTIRTGDDYIESLRGRDLKIYLFGELVENYVDHPIIRPSINAVAETYDLAVREEA
LASADSSLSGLKVNRFLHIAESAEDLVLQNKMQRKLGQNTGTCFQRCVGMDALNSLHSTT
FEIDEKHGTDYHKRFLEFVKMVQKENFVIGGAMTDPKGDRSKGPAEQDDPDLFTRIVKTD
ENGVYVSGAKAHQTGCINSHWIILMPTIRLTETDKDWAIVGAIPADAKGVTYIYGRQSCD
TRSMEEGDIDDGNAKFGGQEALIILDNVFIPWDKIFMNGEYEFASMLVERFTCYHRRSYV
CKTGLGDVLIGAAATIADYNGVPKVSHIKDKIIEMTHLNETIFAAGIASSHQGQKMKSGV
FLNDDMLAQVCKHNVTRFPYEISRLAQDIAGGLVVTLPSEKDFRHPEAGPLLKKYLAGRK
GVDVENRMRILRLIENMTLGRNAVGYLTESMHGAGSPQAQRIQIQRQMQVGYKKNLAKNL
AGITNDIQEPKEPSDYFKRVFKTKDSVL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgtcttaaagacaattagaacaggtgatgactacattgaaagtcttagaggg
cgcgatctcaaaatttacctttttggcgaattagtagaaaattatgttgatcatccaatt
attagaccatcaattaatgctgttgcagaaacttatgatcttgcagtacgtgaagaagca
ctagcttctgctgattcatcactttctggattgaaagtaaatcgatttttacatattgct
gaaagtgcagaagatttagttttacaaaataaaatgcagagaaaacttggacaaaacaca
ggaacatgtttccagagatgtgttggaatggatgcactgaactctttgcattctactacg
tttgaaattgacgaaaaacatggaactgattatcataaacgattcttagaatttgtaaag
atggttcaaaaagaaaattttgtaattggcggtgctatgactgatcctaagggtgataga
agcaaaggtcctgcagaacaagatgaccctgacttgtttacaagaattgtaaagactgat
gaaaatggtgtctatgtttcaggtgcaaaagcacatcaaactggttgtattaactctcac
tggatcatcttaatgccaacaatccgactaactgaaaccgataaggattgggcaattgtt
ggagcaattccagcagatgcaaaaggagtcacttacatttacggtagacaatcttgtgat
accagaagtatggaggaaggtgacattgatgatggtaatgcaaagtttggaggacaagaa
gctttgataattttagataatgtgtttattccttgggataaaatattcatgaatggtgaa
tatgaatttgcatctatgcttgtagagcgatttacgtgttatcatagacgtagttatgta
tgcaaaacaggtctaggtgatgtattaattggagcagcagctacaattgcagattacaac
ggtgttcctaaagtttctcacattaaagataaaattattgagatgactcatctaaatgaa
acaatatttgctgcaggtattgcatcatcccatcaaggacagaagatgaagtctggtgta
ttcctaaatgatgatatgcttgctcaagtttgtaaacataacgttacacgatttccatat
gaaattagtagactagcacaagatattgcaggtggattagtagttacattaccatctgag
aaggactttagacatcctgaagctggaccactactcaaaaaatatcttgctggaagaaaa
ggtgttgatgttgaaaacagaatgagaattttaagattaattgaaaacatgactttgggt
agaaatgccgttggctatttaacagaatcaatgcatggtgcaggctcaccacaagctcaa
agaatccaaattcaaagacaaatgcaagtaggttacaaaaagaatttagccaaaaatctt
gctggtattacaaacgatattcaagaaccaaaagaaccatctgattactttaaacgagta
ttcaaaacaaaagattctgttctttaa
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