Nitrospira defluvii: NIDE3473
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Entry
NIDE3473 CDS
T01281
Symbol
ttgC
Name
(GenBank) RND efflux system, outer membrane factor lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nde
Nitrospira defluvii
Pathway
nde01501
beta-Lactam resistance
nde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIDE3473 (ttgC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIDE3473 (ttgC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3473 (ttgC)
01504 Antimicrobial resistance genes [BR:
nde01504
]
NIDE3473 (ttgC)
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE3473 (ttgC)
Antimicrobial resistance genes [BR:
nde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIDE3473 (ttgC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NIDE3473 (ttgC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NIDE3473 (ttgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3209
Motif
Other DBs
NCBI-ProteinID:
CBK43158
UniProt:
D8PIS1
LinkDB
All DBs
Position
complement(3466534..3467967)
Genome browser
AA seq
477 aa
AA seq
DB search
MRRLALVLSSTLLTACAVGPDFTKPDATTPEAFRMAEAGGNTASIANTPWWELLKDQELQ
KLIRTALEENKDLQRAAAAVEEFQARLFIAKTDFAPQMNVTTNAPLFGRKTNFLFPGFPN
PFNYYLQGNLSWEIDIWGRIRRSNEAARGDLLSREENRRAIVLQLVSGVAEAYFELLQFD
MQLDIARRTLKSWEESVRIAQARLRQGMISKLDADQFEAERANAAAKAAEFERQKVQKEN
QLSVLLGRNPGRIARGHSLTEQVMPPDVPPGLPSELLQRRPDILQAEQDLAAATARIGMA
KADRFPKLSITGILGVASPHLSRLVANETAFGVAGPGFAGPLLNAQILGFQQKAAEAQAR
QAVAQYEQSVLVAFKEVEDSLVAVSTVREQRTAQLQQVDALRSALSLANLRYKGGLANYL
DVLIAQRNLFEAELALMGTHRLHLVSIVQLYKALGGGWTPEGQPPVQALPAVSAQEK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagactggccctggttctttcctcgacccttctaacggcgtgtgctgttggccca
gactttaccaaacctgacgcgacgactccggaggccttccgcatggcggaggcaggtggg
aatactgcctcaatcgcgaatacaccctggtgggagctgctcaaggatcaagagctccaa
aagctgattcgtacggcactcgaagaaaataaagacctccagcgagcggcggcggcggtg
gaagagtttcaggcccgcttgtttatcgcgaagaccgatttcgccccacagatgaatgtt
acgacgaatgcgccgctgttcggtcgaaagaccaatttcctgtttcccggcttccccaat
cccttcaactattacctgcaaggaaatttgtcctgggagatcgacatctggggacgcatt
cgtcgatccaacgaggctgcgcgtggtgatctgttgtcacgggaggagaatcggcgcgcg
attgtgttgcagttggtgagtggcgtcgcggaggcttactttgagctgttgcagttcgac
atgcaactcgacattgcgcggcgtacgctcaagtcctgggaggagtctgtcaggatcgct
caggcgcgattgcgacagggaatgatttccaagctcgatgccgatcaattcgaggctgaa
cgggccaacgctgcggccaaggcggcggagttcgaacgtcagaaagtacagaaggaaaat
caactcagtgtgttgctgggccggaatccgggccggattgcccgcgggcattctttgacg
gagcaggtgatgccgccggacgtgcctcccggccttccttctgagttgttgcagcggcgt
cctgacattctgcaggcggagcaggatcttgccgccgcgacggctcgcatcgggatggca
aaagctgatcggtttccgaagctcagtatcaccggcattctgggtgtggcgagtccgcat
ctgtctcgtttagtggccaatgaaaccgcgtttggtgttgcggggccaggcttcgccgga
ccattgttgaatgctcagattctcggtttccaacagaaagctgccgaggcgcaagcgcga
caagccgtggctcaatatgagcagtcagtgctggtcgcgttcaaggaggtggaggactcg
ctggtcgccgttagcacggttcgtgagcagcgcacggcacagttgcagcaggtcgacgcg
ttgcgttcagcactgagtctcgccaatcttcgttacaagggtggtctggcaaattacctg
gatgtgttgattgcgcagcgcaatctgtttgaggctgagctggcgctgatgggaacccat
cggctccatctcgtctccatcgtgcaattatataaggctcttggcggtggctggaccccg
gaagggcagccgccggttcaggccctgccggcggtctctgcacaggaaaagtga
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