Nitrospira defluvii: NIDE3915
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Entry
NIDE3915 CDS
T01281
Name
(GenBank) putative Outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
nde
Nitrospira defluvii
Pathway
nde01501
beta-Lactam resistance
nde01503
Cationic antimicrobial peptide (CAMP) resistance
nde02020
Two-component system
nde03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NIDE3915
09132 Signal transduction
02020 Two-component system
NIDE3915
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIDE3915
01503 Cationic antimicrobial peptide (CAMP) resistance
NIDE3915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3915
02044 Secretion system [BR:
nde02044
]
NIDE3915
01504 Antimicrobial resistance genes [BR:
nde01504
]
NIDE3915
Transporters [BR:
nde02000
]
Other transporters
Pores ion channels [TC:
1
]
NIDE3915
Secretion system [BR:
nde02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIDE3915
RTX toxin transporter
NIDE3915
Multiple protein transporter
NIDE3915
RaxAB-RaxC type I secretion system protein
NIDE3915
Antimicrobial resistance genes [BR:
nde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NIDE3915
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NIDE3915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CBK43586
UniProt:
D8PJL2
LinkDB
All DBs
Position
complement(3875625..3876983)
Genome browser
AA seq
452 aa
AA seq
DB search
MRRLWRLCLLAQVCSIFIVQPWTPGSAAEPPPGPPELRLSLHEAIQAAIDNNANVRLLKE
RIVAAQSAASTSLGALLPNVSGFMSGSNQTVNLAAFGFPPDRLSGLGLQRPVTEPFDVYN
ARASLVQNIFSLSLIQRWRAAKTGVDVAGFEAEVTKRDVMATAGLLYMEASRAEAAVKAR
LADLELSQQLLKLAQDRKQAGVATGLDVTREEVQLENTRQRLLVAQNDHESAKLNLIRAL
GIDFNVTVTLTDELTLATVESQTPETALSVARENRAELKAQLTRQKLASLSLSSVTSERI
PSLSLNGDYGWIGLKPDEALATRSVGLMLSVPIFDGGQREGRISESRSRVRQELIRMKDV
SDQVTLEVRNALLTLDSSTQQVAVAEKGLSLAMKELTFARDRFAAGLATNIEITNAQTSV
ARARDNLIEALFRFNASRINLARAKGEIEQLF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcggttatggagactctgcttattggcgcaggtgtgttctatcttcatcgtccag
ccgtggactcccggttcggctgccgagccgccgcccgggccccccgagctgcgattgagt
ttgcacgaggcgattcaggccgccatcgacaataatgcgaatgtgcggttgctgaaagag
cggatcgtggcggcccaatcggcggccagtaccagcctgggggcgctattgcccaacgta
tccgggttcatgagcgggagcaatcaaaccgtcaatctcgcagcctttggatttccaccg
gacagactttccggtttggggctgcagcgacccgtgaccgaaccgttcgatgtctacaac
gcgcgggccagtctcgtgcagaacatattcagcctgagtctgattcagcgctggcgggcg
gcgaaaaccggcgtcgatgtggctggatttgaggccgaagttaccaagcgcgacgtgatg
gctacggcaggacttctgtatatggaagcctccagggctgaagcggcggtgaaggccagg
ctggcggatctcgaactcagtcagcagctgttgaagctggcgcaggatcgaaaacaggcg
ggtgtcgccacggggctggatgtgacacgtgaagaagtgcagcttgagaatacacgccag
cgactccttgtggcccagaacgatcacgagagcgcgaagctgaacctcatccgtgcgttg
ggtatcgatttcaacgtcacggtgacgttgaccgacgagctcaccctcgccaccgtcgaa
tctcaaactcccgaaacggctctgtcggtagcccgcgagaatcgcgccgaattgaaggcg
cagctcacgcgccaaaagctggcgtcgctcagtctcagttccgtgaccagtgagcggatt
ccttctctgtccttgaacggcgactatgggtggatcgggctcaagccggatgaagccttg
gcgacgcgatccgtcgggctgatgctgtcggtgcccatcttcgacggcggacaacgggag
ggacggatttccgaaagccggagccgtgtgcggcaggaactgatccgtatgaaggacgtc
tcggatcaggtgacacttgaagttcgaaacgcgctgctcacgctcgactcatccacgcag
caagtggcggtggccgagaaaggattatccctggcgatgaaggaactgacgtttgcgcgg
gaccgtttcgctgccggactcgcgaccaatattgaaattacgaacgcccagacctcggtg
gcgcgcgcgcgtgacaatctgatcgaggcgctgttccgtttcaatgcgtctcgcatcaat
cttgcgcgggcgaagggcgaaatcgaacaattgttctga
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