Novosphingobium decolorationis: HT578_13470
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Entry
HT578_13470 CDS
T07993
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr01501
beta-Lactam resistance
ndr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HT578_13470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HT578_13470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_13470
01504 Antimicrobial resistance genes [BR:
ndr01504
]
HT578_13470
Transporters [BR:
ndr02000
]
Other transporters
Pores ion channels [TC:
1
]
HT578_13470
Antimicrobial resistance genes [BR:
ndr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HT578_13470
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HT578_13470
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HT578_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QVM84560
UniProt:
A0ABX8E8N1
LinkDB
All DBs
Position
2896016..2897488
Genome browser
AA seq
490 aa
AA seq
DB search
MRKCAALLLAGWVSACSLAPEYERPDAAISPVYRDGEVDAASQADAPLAIELGWRQFFRD
PRLQSLIAAALTNNRDLAQSYARVDQARAQFRIQAAGRLPALDATGTGTRSQTPIAGLGA
VGSAIPGDGSGGGGPPVPDSIRFTQFGANLGVSSFELDLWGRVRNLTRQQRENWLASVEG
ARAYRLSLIAQVAATYFDIRAGEERIALARRSLEGRREGERIAHMRLEAGVTSTADYDQT
VLLLTQAETELAEIQRTTEQARNLLNVLVGGPITGPMPAGLSLSEQVVPITAGLPSSLLE
QRPDILQAEHALMGANANIGAARAAYFPTISLTGTLGFMSNALGSLFDGASESWSYGGTA
SLPIFNWGRREAEVRLSKAQAAELEAAYQSAVQNAFREVADGLVGRERFAEQIEIQQRTI
AAQRRLARTARLRYDNGIAIYLEVLDAERSLFSASQTLISLRATELQNAVNLYTALGGGL
EEVAAASGED
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtgcgccgcactgctcctggcaggatgggtcagcgcctgcagcctcgcccct
gaatacgagcgccccgatgcggcgatttcgcccgtctaccgggacggggaggtggacgcc
gcctcgcaagccgacgccccgctcgcgatagagctgggctggcgtcagttcttccgcgac
ccgcgcctccagtcgctgattgcagcggcgctcaccaacaaccgcgacctggcccagtcc
tacgcccgggtcgaccaggcccgcgcgcagttccgcatccaggccgccggccgccttccc
gcactcgacgcaacaggcaccggcacacgcagccagacccccatcgcggggctcggcgcg
gtcggctcggcaattccgggcgacggcagcggcgggggaggcccacctgtgcccgactcc
atccgcttcacccagttcggtgcgaacctgggcgtcagttcgttcgagctcgacctgtgg
ggccgggtgcgcaacctcacgcgccagcagcgcgagaactggctggcttcggttgagggc
gcgcgcgcctaccgtctctcgctcatcgcgcaggtcgccgcgacctacttcgacatccgc
gcgggagaagagcgtatcgcgctggcccgccgcagcctcgaagggcgccgcgagggcgag
cgcattgcccacatgcgccttgaggccggggtcacctcgaccgccgactacgaccagacc
gtgctcctcctcacccaggccgagaccgaactggccgagatccagcgcaccaccgagcag
gcgcgcaacctgctgaacgtgctggtcggcgggccgatcaccggcccgatgcccgccggg
ctctcgctgtccgagcaggtcgtgccgataacggcgggactaccctccagcctgctcgaa
cagcgccccgacatcctgcaggccgaacacgcgctgatgggggccaacgcgaacattggc
gcggcgcgcgcggcctatttcccgacgatctcgctgaccggcacgctgggtttcatgtcg
aacgcgctcggctcgctcttcgacggcgcgagcgagagctggagctatggcggcacggcc
agcctgccgatcttcaactggggacggcgcgaggccgaggtgcgcctcagcaaggcgcag
gccgccgaactggaagcggcttaccagtcggccgtgcagaatgcctttcgcgaggtcgcc
gacgggcttgtcgggcgcgagcgcttcgccgagcagatcgagatccagcagcgcaccatt
gccgcgcagcgccggctcgcccgcacggcgcgcctgcgctacgacaacggcatcgcgatc
tacctcgaagtgctcgacgccgagcgcagcctgttctcggcgagccagacactgatttcg
ctgcgcgcgaccgaactgcagaacgcggtcaacctctatacggcgctcggcggcggcctc
gaggaggtcgcggcagcctcgggcgaagactga
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